Pairwise Alignments

Query, 472 a.a., diguanylate cyclase from Escherichia coli ECRC102

Subject, 367 a.a., GGDEF domain protein from Marinobacter adhaerens HP15

 Score =  104 bits (259), Expect = 6e-27
 Identities = 90/298 (30%), Positives = 136/298 (45%), Gaps = 16/298 (5%)

Query: 172 LIVPCMLTLAIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLAFPL--PALIWCAVR 229
           LI   ML  A  G   R KA  ++    L   +IAS      G L F +  P L +    
Sbjct: 60  LIALNMLYFASTGNRARQKAGMIVIVGLLFTYLIASGGESNTGPLWFYVFPPLLFYLTDL 119

Query: 230 YTPQVTCLLTFVTGAVEIVLVANSVIDISVGSPFSIPQMFSARLGIATMAICPIMVSFSV 289
            T     L  ++   V        ++       F I   F A L   ++  C ++ +  +
Sbjct: 120 KTGTAVLLFCYLVAVVVFQFPGLPLVSAEYSMDFKI--RFFAALTFESI-FCFVLEASRL 176

Query: 290 AAINSLMKQVALR---ADFDFLTQVYSRSGLYEALK---SPSLKQTQHLTVMLLDIDYFK 343
            A N L+         A  D LT + +R  +   L    S   +   H ++ L+D+D FK
Sbjct: 177 KARNELLTLAETHEHAARTDELTGLANRRDMQNRLAMEFSRYQRSGHHFSIALIDLDLFK 236

Query: 344 SINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAEKIR 403
            IND +GH+ GD VL  FA  I+ ++    + AR GGEEF V +P  + +  L +AE++R
Sbjct: 237 QINDQFGHDAGDDVLREFAGLIRTVIRQADVAARWGGEEFLVLLPDTSLLQALTLAERLR 296

Query: 404 KGVELQPFTWQQKTLYLTVSIGVGSGRASYRTLTDDFNKLMVEADTCLYRSKKDGRNR 461
             V    F ++ + L +T+S GV S  A  R+L D    L+ +AD  LY +K+ GRNR
Sbjct: 297 SDVSRHAFRFRDQALPVTISAGVCS-IAKARSLDD----LLKQADLHLYNAKESGRNR 349