Pairwise Alignments

Query, 890 a.a., phosphotransferase RcsD from Escherichia coli ECRC102

Subject, 696 a.a., GAF/PAS-family sensor histidine kinase from Caulobacter crescentus NA1000

 Score = 68.9 bits (167), Expect = 1e-15
 Identities = 76/318 (23%), Positives = 137/318 (43%), Gaps = 32/318 (10%)

Query: 447 KLKQAQRLYEKNQQGRMTFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQADVLVRLV 506
           +L+ A  L E+  + +  F+ N+   ++ P   +   A+ L       L ++   +V ++
Sbjct: 309 ELRDALELAERASRVKSQFVANVSHEIRTPLNGVIALASALR---QSALTDRQREMVEII 365

Query: 507 DE------------IQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQLLIN 554
            E            + LA + A+   + E V F ++DL+             KGL   ++
Sbjct: 366 VESGTTLESILSALLDLAKIEAE-RMELEIVSFGLEDLVRSSTDLFKIKADNKGLGFDVS 424

Query: 555 NHLKAHDMRRGDRDALRRILLLLMQYAVTSTQLGKITLEVDQD--ESSEDRLTFRILDTG 612
                    RGD   +R+IL  L+  A+  T  G+I + V  +  + +   L   + DTG
Sbjct: 425 VIAPPGARYRGDAQKIRQILWNLLANAIKFTDAGEIAVSVTVEGADPAAQTLLIEVRDTG 484

Query: 613 EGVSIHEMDNLHF-PFI--NQTQNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTR 669
            G+S  EM+++ F PFI  + +   R+G    L   +   LAR +GG +    R   G+ 
Sbjct: 485 VGLS-PEMEHVLFEPFIQGDASATRRFGGTG-LGLTICRALARMMGGDIEALARAERGSV 542

Query: 670 YSVHIKMLAADPEVE---EEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATCITPDER 726
           + VH+ +  A+PE     E E  L   + +++   +   R +V   LE  GA  +  +  
Sbjct: 543 FRVHVPVSTAEPEASVAVESEADLATAMTILLVEDNPNNRRVVELLLEPTGAELVMAENG 602

Query: 727 ------LISQDYDIFLTD 738
                 L +Q +D+ L D
Sbjct: 603 AEALTILATQRFDLILMD 620