Pairwise Alignments

Query, 890 a.a., phosphotransferase RcsD from Escherichia coli ECRC102

Subject, 517 a.a., putative two-component system sensor histidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 67.0 bits (162), Expect = 3e-15
 Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 29/242 (11%)

Query: 445 NKKLKQAQRLYEKNQQGRMTFMKNIGDALKEPAQSLAESAAKLNAPE---SKQLANQADV 501
           N+KLK++  +  ++ + +  F++NI   ++    +L  SA +L+A     ++Q+  Q   
Sbjct: 291 NRKLKKSVVIANEHNELKTKFIRNISSQMEPTLNTLGTSAKELSAQAPRYAEQMQAQVAA 350

Query: 502 LVRLVDEIQ----LANMLADDSWKSE----TVLFSVQDLIDEVV-PSVLPAIKRKGLQLL 552
           L +  D IQ    L N L +     E    T   SV +   E + P V P++    LQ+ 
Sbjct: 351 LKQFSDNIQELSSLENSLTEPYEMGEVNAGTFCESVMEKAKEFMKPDVTPSVNAPKLQVK 410

Query: 553 INNHLKAHDMRRGDRDALRRILLLLMQYAVTSTQLGKITLEVDQDESSEDRLTFRILDTG 612
            N            ++ L RILL L++ A   T+ G+I+L+  +  +   +  F I DTG
Sbjct: 411 TN------------KEQLERILLYLLKNAAFYTEQGRISLDFKKRGAHTHQ--FIITDTG 456

Query: 613 EGVSIHEMDNLHFPFINQTQNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSV 672
            G+   + +NL  PF   TQ       D L   +   +A K+ G L + T    G R+ +
Sbjct: 457 TGIPAEQQENLFKPF---TQVKDLTTGDGLGLPICSLIATKMNGSLTLDTSYTKGCRFIL 513

Query: 673 HI 674
            +
Sbjct: 514 EL 515