Pairwise Alignments

Query, 326 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Escherichia coli ECRC102

Subject, 558 a.a., pseudouridine synthase, RluA family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  177 bits (448), Expect = 7e-49
 Identities = 115/317 (36%), Positives = 165/317 (52%), Gaps = 24/317 (7%)

Query: 10  TVSENQLGQRLDQALAEMFPDY----------SRSRIKEWILDQRVLVNGKLCDKPKEKV 59
           TV+    GQRLD+ L +   +           SR ++K  I D    V G+ C  P  +V
Sbjct: 17  TVAPEHAGQRLDRFLGDAMAEQRERDGHGDAVSREKVKRAIRDGAATVQGRACTVPNTRV 76

Query: 60  LGGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIVINKPRDLVVHPGAGNPDGTVLNAL 119
             G+ V +   +   A+  P+D  L ++Y D  I V++KP  L VHP    P+GT+++ L
Sbjct: 77  EPGQTVTLTLAVPA-AKVTPEDGDLAVLYRDAAIAVLDKPAGLTVHPCPSCPEGTLVHRL 135

Query: 120 LHYYPPIADVP--RAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIG 177
           + ++P +A     R GIVHR+DKDT+GL++VA T   +  L  +   R++ +EY A+  G
Sbjct: 136 VRHFPELAAQEGFRPGIVHRIDKDTSGLLLVALTEAVRLELSRAFAERQVHKEYLALVHG 195

Query: 178 HMTAGGTVDEPISRHPTKRTHMAVHPM---GKPAVTHYRIM--EHFRVHTRLRLRLETGR 232
              A G ++ PI RHP  +  MAV P    GKPA + +R++  +       + +R+ TGR
Sbjct: 196 VPKAQGELEAPIGRHPLHKVKMAVVPENRGGKPARSAWRVLLADPDGRFALVAVRIFTGR 255

Query: 233 THQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKF-DRQALHATMLRLYHPIS 291
           THQIRVHMAH+ HPL  D VYG     P  A       L  F  RQ LHA  L   HP +
Sbjct: 256 THQIRVHMAHLGHPLWQDAVYG-----PSEAVAPAAGELPDFPPRQMLHAWRLSFRHPET 310

Query: 292 GIEMEWHAPIPQDMVEL 308
             +M +  P P D   L
Sbjct: 311 DRDMHFTCPPPPDFAAL 327