Pairwise Alignments

Query, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Escherichia coli ECRC102

Subject, 245 a.a., 16S ribosomal RNA methyltransferase RsmE from Sinorhizobium meliloti 1021

 Score = 95.5 bits (236), Expect = 9e-25
 Identities = 67/245 (27%), Positives = 122/245 (49%), Gaps = 12/245 (4%)

Query: 2   RIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFDGSNQVFDAEITSASKKS 61
           R+ R++    L + +      +  N++  VLR+G G +L +F+G +  + AEI   S+K 
Sbjct: 6   RMQRLFIENALHAGAKHEATREQFNYLINVLRLGEGSSLLVFNGRDGEWRAEIAMPSRKQ 65

Query: 62  VEVKVLEGQIDDRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLDS 121
             +  +E Q   + +P  +       +  ++++ +QK++E+G  ++ P+ ++    K+ S
Sbjct: 66  AVLVAVE-QTRPQPAPCDLVYLFAPLKVGRLDYLVQKAVEMGAGVLQPVMTQHVQGKIGS 124

Query: 122 ERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWCAEQDEGLKLNLHPRASNSINT 181
                 L++ +   I A EQCG   +P +     LE    +     ++      ++S N 
Sbjct: 125 ------LERVRANVIEAAEQCGVLGIPAVEEPRKLEDLLIDWPRDRRIVFCDEGNDSQNP 178

Query: 182 LPL----PVERVRLLIGPEGGLS-ADEIAMTARYQFTDILLGPRVLRTETTALTAITALQ 236
           LP+       R+ LLIGPEGG S A+   + +R   T I LGPR+LR +T A+ A+  +Q
Sbjct: 179 LPILEGIAERRLALLIGPEGGFSEAERDLLRSRDFVTAIPLGPRILRADTAAVAAMAVIQ 238

Query: 237 VRFGD 241
              GD
Sbjct: 239 ATLGD 243