Pairwise Alignments

Query, 309 a.a., TIGR01212 family radical SAM protein from Escherichia coli ECRC102

Subject, 330 a.a., putative radical SAM protein (RefSeq) from Shewanella loihica PV-4

 Score =  331 bits (848), Expect = 2e-95
 Identities = 165/299 (55%), Positives = 215/299 (71%), Gaps = 1/299 (0%)

Query: 3   LQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEAQQHRS 62
           L   VN FG    R+YGQ++ KLTL   F+CPNRDGT+GRGGCTFCNVASF+ E     S
Sbjct: 22  LDSHVNTFGLHCKRQYGQRLKKLTLDAKFTCPNRDGTLGRGGCTFCNVASFSHEHGSIDS 81

Query: 63  IAEQLAH-QANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPDC 121
           IA QLA+ +     ++ +++AYFQAYTST+ E Q+L+  Y +AV+ ++IVGLCVGTRPDC
Sbjct: 82  IAVQLANGRERAQGKSSKFIAYFQAYTSTYDEYQLLKQRYDEAVADSDIVGLCVGTRPDC 141

Query: 122 VPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVC 181
           V D V+ LL  Y+ +G EVWLELGLQ+A+ +TL RINRGH F  Y+ T   AR+ GLKVC
Sbjct: 142 VSDEVIALLAGYQARGLEVWLELGLQSANLETLKRINRGHGFEEYRDTVIRARKAGLKVC 201

Query: 182 SHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDY 241
           +HLI+GLPGE   + L +   V++ GVDG+K+HPLHIV+GS MAKAW AGR++ +  E Y
Sbjct: 202 THLILGLPGESHEDFLASHRAVLDAGVDGLKIHPLHIVEGSTMAKAWRAGRMSLLTQEAY 261

Query: 242 TLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNEHGVQGSAL 300
             + GE+IR TP EVI+HR++A A++P LLAP WC  RW G+V + + L   G QG  L
Sbjct: 262 AESVGELIRLTPKEVIFHRVTAYAKKPMLLAPDWCAYRWEGLVAIVKNLERLGGQGHYL 320