Pairwise Alignments

Query, 617 a.a., Uncharacterized protein YacH from Escherichia coli ECRC102

Subject, 458 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  162 bits (409), Expect = 4e-44
 Identities = 135/551 (24%), Positives = 223/551 (40%), Gaps = 117/551 (21%)

Query: 58  TVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPDALLSQVLMASTYPTNVAQAVQWSHDNP 117
           T S      AV +  FS A++ Q +AP+ALYPD+LL+ +L+ASTYP  V QA +W + N 
Sbjct: 21  TPSVSRAEDAVQEIQFSDAELAQMLAPIALYPDSLLTHILIASTYPLEVVQANRWRNKNK 80

Query: 118 LKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDSVQR 177
             +G  A+     + WD SV +LVAFP L+  + ++ +W Q LGD FL   + V+DS+Q 
Sbjct: 81  SLEGAEAVNRAEKKDWDPSVTALVAFPDLLQRLSDDLEWTQKLGDTFLQDEERVLDSIQS 140

Query: 178 LRQLAQQTGSLKSSTEQKVITTTKKTVPVTQTVTAPVIPSNTVSTANPVITEPATTVISI 237
           LRQ A++  +       KV    ++ V                                I
Sbjct: 141 LRQQAERANAFDDMENMKVTKVNRQIV--------------------------------I 168

Query: 238 EPGNPDVVYIPNYNPTVVYGNWANTAYPPVYLP-PPAGEPFVDSFVRG-FGYSMGVATTY 295
           EP   +V+Y+P Y+  VVYG+W    YPPVY   PP    +    + G F ++ G+  ++
Sbjct: 169 EPVQREVIYVPYYDTRVVYGHWHWYNYPPVYWAYPPHYARYYPGHISGHFYFNSGIHISF 228

Query: 296 -ALFSSIDWDDDDHDHHHHDDDNYHHHDGGHRDGNGWQHNGDNINIDVNNFNRITGEHLT 354
              FS+  W         H    +HHH   +R                  ++RI     +
Sbjct: 229 NYFFSAFSW------RQRHIVVTHHHHTTRYRP-----------------YSRIV---TS 262

Query: 355 DKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSATQLPAPTRDSQRQAAASQFQQR 414
                W H P +R+GV Y    +  R+ +   N             D +  ++  ++   
Sbjct: 263 SGAQRWHHKPVHRHGVAYRSPKVKARYDKYRPN-----------RYDVKHNSSMERYSNS 311

Query: 415 THAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQ 474
             A P               ++A+HY +    +   R Q  + +  DA  Q         
Sbjct: 312 KQAKP---------------SQAKHYNAAQVQK--RREQNFSHKLSDARSQ--------- 345

Query: 475 RQAVHEKMQTNPQNQQRREAARERIQPASPEQRQAVREKMQTNPQIQQRRDAARERIQSA 534
               H++ Q   +   +    R+R+       R +      +N    + ++  RE+    
Sbjct: 346 ----HDRHQNAQKTPTKYYEKRDRLSLNDKANRSS------SNKADNRTKEWNREK---- 391

Query: 535 SPEQRQVFKEKVQQRPLNQQQRDNARQRVQSASPEQRQVFREKVQESRPQRLNDSNHTAR 594
           SP++   +     QR +   QRDN   + QS   E+     +  Q  R  + N+    + 
Sbjct: 392 SPQRNDSY-----QREMKSHQRDNKSHQQQSYQRERSHQPVKSPQRERSHQTNNGRGASS 446

Query: 595 LNNEQRSAVRE 605
            N + R+  R+
Sbjct: 447 HNQQGRTKQRD 457