Pairwise Alignments

Query, 264 a.a., type VI secretion system protein TssA from Escherichia coli ECRC102

Subject, 469 a.a., type VI secretion system protein TssA from Vibrio cholerae E7946 ATCC 55056

 Score =  170 bits (430), Expect = 6e-47
 Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 6/264 (2%)

Query: 6   APAPQIAIDSHDDKAWRDTLLKVAAILCERQPDSPQGYRLRRHALWQSITSTPQAESDGR 65
           +PA  + +D   DKA + TLLKVA  L E++       RLRR A+W SITS P  + DG 
Sbjct: 206 SPAASMVVDHSSDKAAKQTLLKVADFLAEQEFGIALSIRLRRFAVWGSITSLPDHKPDGE 265

Query: 66  TPLAAVSADMVADYQSRLASADMALWQQVEKSVLLAPYWLDGHCLSAQTALRLGYKQVAD 125
           T L  + AD V DYQ +L   D+ALW++VE+S+ +APYW +G  +S   A +LG      
Sbjct: 266 TLLRGMQADRVKDYQDQLRHPDLALWRKVEQSLTMAPYWFEGQWMSYTIAQQLGKSDWCQ 325

Query: 126 TIRDEVIRFLERLPQLTGLLFNDRTPFLSEQTKQWLAASPDGKVAPVAQIGEESQAARAC 185
            I +E  +FL RLP L  L F    PF+S+  K+WLA+    + A    +G + Q  R  
Sbjct: 326 AIAEETQQFLRRLPSLLELKFKGGEPFVSDSVKEWLASVGQSQGAAGQSVGGDWQEKRKE 385

Query: 186 FAGQGLEAALRY-LDMLPEG-----DPRDQFHRQYLAAQLTEEAGLIQLAQQQYRMLLMI 239
                 E  +   L ML +G     +PRD+F+ + L+A L     L  +A +QY+ LL  
Sbjct: 386 AFQLAKEGGIAVALSMLNDGLVSAVEPRDKFYWRLLSADLLRANHLDAMAGEQYQTLLNQ 445

Query: 240 GSQMMVSDWEPSLLTQLEQKFTAE 263
            + + V +WEPSL+ Q+++  T+E
Sbjct: 446 VTTLSVPEWEPSLVEQIQRYTTSE 469