Pairwise Alignments

Query, 583 a.a., long-chain-fatty-acid--CoA ligase FadD from Escherichia coli ECRC102

Subject, 562 a.a., AMP-dependent synthetase and ligase from Pseudomonas syringae pv. syringae B728a

 Score =  602 bits (1551), Expect = e-176
 Identities = 299/559 (53%), Positives = 398/559 (71%), Gaps = 12/559 (2%)

Query: 27  WLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVNMGEVMTFRKLEERSRAFAAY 86
           W ++ PA V  E++   YQS+VD+FE+   ++AD+PAF NMG  +T+ +LE  S AFAAY
Sbjct: 6   WDDKRPAGVDAEVDLQTYQSVVDVFERCCRKFADRPAFSNMGVTLTYAELERHSAAFAAY 65

Query: 87  LQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDSGASA 146
           LQQ   L  GDR+A+ MPN+LQYP+A+FG +RAG+ VVN NPLYT RE+ HQ  DSGA A
Sbjct: 66  LQQHTQLVPGDRIAVQMPNILQYPIAVFGAMRAGLTVVNTNPLYTAREMRHQFKDSGARA 125

Query: 147 IVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHLPDAI 206
           +V ++ F   +++V+  TA++++I  +MGD  S AKG LVN +V  +K++VP++HLP A+
Sbjct: 126 LVYLNLFGKLVQEVLPDTAIEYLIEVKMGDMQSAAKGWLVNTIVDKVKKMVPEFHLPQAV 185

Query: 207 SFRSALHNGY--RMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNATY 264
            F+ AL  G   RMQ V   L  +D+A LQYTGGTTG+AKGAMLTH N++AN++QV A  
Sbjct: 186 GFKRALRLGRDSRMQVVPRGL--QDVAVLQYTGGTTGLAKGAMLTHGNLVANMQQVYACM 243

Query: 265 -------GPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKEL 317
                  G L   GKE+++  LPLYHI+A T NC+  +  G  N+LITNPRDI G +KEL
Sbjct: 244 RQQGPRGGSLFEEGKEVMIAPLPLYHIYAFTANCMCMMISGNHNILITNPRDIGGFIKEL 303

Query: 318 AKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLLE 377
            K+ FTA+ G+NTLF AL+N+ EF++LDFS+L  +  GG  + +  AERW ++TG  ++E
Sbjct: 304 GKWQFTAMIGLNTLFVALMNHPEFKKLDFSALKSTNSGGTALVKATAERWAQITGCTIVE 363

Query: 378 GYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVSPGQPGELCVRGPQVM 437
           GYGLTE +P+ S NPY      G++G+PVP T  K++DD+  E+  G+ GELC++GPQVM
Sbjct: 364 GYGLTETSPVASANPYGTMARLGTVGIPVPGTAMKVIDDNGVELPFGERGELCIKGPQVM 423

Query: 438 LGYWQRPDATDEII-KNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVV 496
            GYW +PDAT E +   GW  TGDIAV+  +GF+ IVDRKKD+I+VSGFNVYPNEIEDVV
Sbjct: 424 KGYWNQPDATAECLDAEGWFKTGDIAVIGADGFVSIVDRKKDLIIVSGFNVYPNEIEDVV 483

Query: 497 MQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPKLVEFRD 556
           M HP V   A +GVP   SGEAVK+FVV +DP L+ E L  FC+   TGYKVP+ +  RD
Sbjct: 484 MAHPKVANCACIGVPDERSGEAVKLFVVARDPGLSIEELKAFCKENFTGYKVPRQIVLRD 543

Query: 557 ELPKSNVGKILRRELRDEA 575
            LP + VGK+LRRELRD A
Sbjct: 544 SLPMTPVGKVLRRELRDIA 562