Pairwise Alignments

Query, 308 a.a., HTH-type transcriptional activator AllS from Escherichia coli ECRC101

Subject, 300 a.a., putative DNA-binding transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  176 bits (445), Expect = 8e-49
 Identities = 90/273 (32%), Positives = 154/273 (56%), Gaps = 1/273 (0%)

Query: 1   MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTA 60
           M   ++L     VA+ GSF+ AA +L K  + +SY IK +E+  GV LF R  RSV+LT 
Sbjct: 1   MLSEQSLELVDIVAQVGSFTAAAAKLHKVPSAVSYAIKQIEDELGVVLFNRHHRSVSLTV 60

Query: 61  AGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLLYNPQAVAQLLAWLNERYP 120
           AGEH + +AR  LS ++ +    Q++ +G +  ++I ++N++     ++ L+A     + 
Sbjct: 61  AGEHFVREARAMLSQMDELKRGTQRIANGWQPTLSIALDNIV-RADKISVLIADFYRHFQ 119

Query: 121 FTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSLDPLGSVQWRFVMAADHPLA 180
             +  I  +++ GVW++L      +AIG T    +   F    +G + W F+++ +HPLA
Sbjct: 120 DVELIIRIEVFNGVWEALATGRSHIAIGATTAIPVGGVFQYRDMGVIDWAFLVSKNHPLA 179

Query: 181 NVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGF 240
           ++E PL++  LR FP++ +ED++R + KR  W L  Q+ ++VPD    I     G+GIG+
Sbjct: 180 SIEAPLSDDMLRPFPSICLEDTSREIPKRTTWLLDNQRRLVVPDWIRAINCFTNGLGIGY 239

Query: 241 LPKSLCQSMIDNQQLVSRVIPTMRPPSPLSLAW 273
           +P+ L    I    L+ + +   + PSP  LAW
Sbjct: 240 MPRHLAAPFIQAGLLMEKTLEQPKAPSPCCLAW 272