Pairwise Alignments

Query, 316 a.a., Uncharacterized HTH-type transcriptional regulator YeeY from Escherichia coli ECRC101

Subject, 300 a.a., putative DNA-binding transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  167 bits (423), Expect = 3e-46
 Identities = 90/280 (32%), Positives = 148/280 (52%)

Query: 15  LMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGKMLL 74
           + ++D + + GSF AA+ KL+K PSA+SY V ++E DL + L +R       T  G+  +
Sbjct: 7   MQLIDMVARVGSFTAAANKLHKVPSAVSYAVKQVEEDLGVVLFERHHRSVSLTPAGEHFV 66

Query: 75  EKGREVLHTVRELEKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHNVTRLKFI 134
           ++ R +L  +  L++   ++  GW+  L I +D+      ++ LI  FY+H +   L   
Sbjct: 67  KQVRSMLTHLASLKEDTKRVANGWQPTLSIALDNIVRADKISNLIADFYRHFDNVELIIR 126

Query: 135 NGVLGGSWDALTQGRADIIVGAMHEPPSSSEFGFSRLGDLEQVFAVAPHHPLAQEEEPLN 194
             V  G W+A+  GR+DI +GA    P   ++ F  +GD+E  F V+ HHPLA  + PL 
Sbjct: 127 IEVFNGVWEAIATGRSDIAIGATTAIPVGGDYRFKDMGDIEWTFLVSKHHPLAAIDRPLL 186

Query: 195 RRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGYLPRYLAQ 254
              ++ Y +I + DT++      + LLD Q  + V D+   +     GLG GY+P++ A 
Sbjct: 187 DDELRSYPSICLEDTSREIPKRMTWLLDNQRRLVVPDWIRAINCFREGLGIGYMPKHFAT 246

Query: 255 RFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASGWWRD 294
            F+ +GALIEK++       P  + WN+     A  W  D
Sbjct: 247 PFVQAGALIEKELERPKAPSPCCLAWNDANMSPAMAWVLD 286