Pairwise Alignments

Query, 411 a.a., NAD-dependent dihydropyrimidine dehydrogenase subunit PreA from Escherichia coli ECRC101

Subject, 304 a.a., dihydroorotate dehydrogenase from Methanococcus maripaludis S2

 Score =  150 bits (379), Expect = 5e-41
 Identities = 99/311 (31%), Positives = 168/311 (54%), Gaps = 21/311 (6%)

Query: 13  VKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPRFDH--LVKEDTG 70
           ++F NP  L++  +G       +    G G V  K++G     E  P  ++  +V+ + G
Sbjct: 9   IEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGI----EKKPGHNNPTMVEVEGG 64

Query: 71  FIGFKNMEQIAEHPLEENLAALRRLKEDYP--DKVLIASIMGENEQQWEELARLVQEAGA 128
           F+   N   +     +E    + R+K++    +  +I SI G+N+ ++++ A ++     
Sbjct: 65  FL---NAMGLPNPGADEYAGEIERIKDEMKRMNVKIIGSIYGKNDSEFQKAAEIIGNY-V 120

Query: 129 DMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALA 188
           D++E N SCP       GS +GQ P L +    AVK  S +P++AK+TPN+ D+ E+A A
Sbjct: 121 DVLELNISCPH-AGGGYGSSIGQDPYLCKNVVSAVKDVSDIPVIAKLTPNVTDIKEIANA 179

Query: 189 AKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALRFIQQMRTH 248
               GADGI AINT+     ID+    G+PI+  +  + G SGKAVKPIA++ +  + + 
Sbjct: 180 VVNAGADGIVAINTLGPGMVIDIES--GVPILGNR--VGGMSGKAVKPIAVKNVYDICS- 234

Query: 249 PELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQG 308
               D P+ G+GGI T  DA EF++ GA+ +QV TG+   GY I + + + +  YL  + 
Sbjct: 235 --AVDVPVIGVGGITTGADAIEFMMAGASAVQVGTGVYYRGYDIFQKINNEIEEYLLKKD 292

Query: 309 FDSLQEMVGLA 319
              + +++G+A
Sbjct: 293 L-KMSDIIGIA 302