Pairwise Alignments

Query, 137 a.a., DNA-binding transcriptional regulator H-NS from Escherichia coli ECRC100

Subject, 134 a.a., DNA-binding protein StpA from Escherichia coli Nissle 1917

 Score =  147 bits (371), Expect = 6e-41
 Identities = 78/135 (57%), Positives = 94/135 (69%), Gaps = 1/135 (0%)

Query: 1   MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60
           MS  L+ LNNIRTLRA ARE +++ LEEMLEK  VV  ERREEE     E+ ER  K+  
Sbjct: 1   MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKIST 60

Query: 61  YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK 120
           + E++ ADGI+P ELL + +A       KR  RPAKY ++D NGETKTWTGQGRTP  I 
Sbjct: 61  WLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFIDVNGETKTWTGQGRTPKPIA 120

Query: 121 KAMDEQGKSLDDFLI 135
           +A+ E GKSLDDFLI
Sbjct: 121 QALAE-GKSLDDFLI 134