Pairwise Alignments

Query, 798 a.a., dimethyl sulfoxide reductase subunit A from Escherichia coli ECRC100

Subject, 950 a.a., formate dehydrogenase alpha subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  142 bits (359), Expect = 7e-38
 Identities = 156/649 (24%), Positives = 271/649 (41%), Gaps = 132/649 (20%)

Query: 5   ISRRSLMKTSALGSLALASSAFTLPFSQMVRAAEA-------PVEEK-AVWSSCTVNCGS 56
           ISRR  MK + + +  +A+++  L  + M+R AEA       P+E K  + S+C V CG 
Sbjct: 20  ISRRQFMKQAGITTGGIAAAS--LMGTGMMRRAEAKDVPHDAPIEVKRTICSACAVGCG- 76

Query: 57  RCLLRLHVKDDTVYWVESDTTGDDVY--GNHQVRACLRGRSIRRRMNHPDRLKYPMKRVG 114
                L+ +     W   +   D  +  G H    C +G ++R   +   RLKYPMK V 
Sbjct: 77  -----LYAEVQNGVWTGQEPAFDHPFNAGGH----CAKGAALREHGHGEKRLKYPMKLV- 126

Query: 115 KRGEGKFERISWDEALDTISDNLRRILKDYGNEAVHVLYGTGVDGGNITNSN---VPYRL 171
              +GK+++ISW++A++ + D +  I K+ G ++V+ +       G+   SN     YR 
Sbjct: 127 ---DGKWKKISWEDAINEVGDQMLNIRKESGPDSVYFM-------GSAKFSNEGCYMYRK 176

Query: 172 MNSCGGFLSRYGS----YSTAQISAAMSYMFGANDGNSPDDIANTKLVVMFGNNPAETRM 227
           + +  G  +   S    +ST     A ++ +GA   NS +DI N   + + G NPAE   
Sbjct: 177 LAAMWGTNNVDHSARICHSTTVAGVANTWGYGAQT-NSFNDIQNANAIFLIGANPAEAHP 235

Query: 228 SGGGVTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLPIRPGTDGALACAIAWVLISE 287
                  ++  A+E++NA++IV+DPR++ TAA   D    IRPGTD      + W +   
Sbjct: 236 VS---MQHILIAKEKNNAKIIVVDPRFSRTAA-HSDLHCAIRPGTDIPFIYGMLWHIFEN 291

Query: 288 NMVDQPFLDKYCVGYDEKTLPANAPRNAHYKAYILGEGPDGIAKTPEWAAKITSIPAEKI 347
              D+ F+ +    ++ +T+     +                   P+  A IT +  E +
Sbjct: 292 GWEDKTFIQQRV--FEMETIREEVKK-----------------FPPKEVADITGVSEEVV 332

Query: 348 IQLAREIGSAKPAYICQGWGPQRHSNGEQTSRAIAMLSVLTGNVGINGGNSGVREGS--- 404
            Q A+ +   +P  +    G  +H  G   +RA  +L +  GN+G++GG + +  G    
Sbjct: 333 YQAAKLMAENRPGTVIWCMGGTQHHVGNANTRAYCILQLALGNMGVSGGGTNIFRGHDNV 392

Query: 405 ------------------------------WDLGVEWFP--------MLENPVKTQ-ISV 425
                                         WDL +EW          + ++P+ T  I  
Sbjct: 393 QGATDLGLLFDNLPGYYGLTSAAWTHWTHVWDLDMEWVKSRFDQNAYLGKDPMTTPGIPC 452

Query: 426 FTWTNAIDHGTEMTATRDGVRGKEKLDVPIKFLWCYASNTLINQHGDINHTNEVLQDDSK 485
             W + +       A +D +R        + F W  + NT   Q        EV     K
Sbjct: 453 SRWHDGVLEDKSKLAQKDNIR--------MAFFWGQSVNTETRQ-------REVRDALDK 497

Query: 486 CEMIVGIDHFMTASA-----KYCDILLPDLMPTEQEDLISHESAGNMGYVILAQPATSAK 540
            + +V +D F T +      K    LLP     E +  +S+          + QP     
Sbjct: 498 MDTVVVVDPFPTMAGVMHRRKNGVYLLPAATQFETQGSVSNSGRSIQWREQVIQPL---- 553

Query: 541 FERKPIYWMLSEVAKRLGPDVYQTFTEGRSQHEWIKYLHAKTKERNPEM 589
           FE K    ++  +A++LG  + + +T+  ++   +  +   T+E N  M
Sbjct: 554 FESKTDIEIMYRLAQKLG--IAEQYTKRIAKENGLPVIEEITREINRGM 600



 Score = 43.1 bits (100), Expect = 7e-08
 Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 7/129 (5%)

Query: 624 PLKTPSGKIEIYSERLAKIADTWELKKDEIIHPLPAYTPGFDGWDDPLRKTYPLQLTG-- 681
           P + P  +  +Y+ R   +A  +    D  +H LP         D      YPL LT   
Sbjct: 766 PDQVPVHREPLYTARRDLVAK-YPTYDDMQVHRLPTLYKSIQEKD--FSGKYPLVLTSGR 822

Query: 682 -FHYKARTHSSYGNIDVLQQACPQEVWINPIDAQARGIRHGDTVRVFN-NNGEMLIAAKV 739
              Y+     S  N  + +      V INP DA  RGIR+G+ V +     G + + A V
Sbjct: 823 LVEYEGGGEESRSNPWLAELQQEMFVEINPGDAADRGIRNGEFVWLEGAEGGRIKVQALV 882

Query: 740 TPRILPGVT 748
           TPR+ PGVT
Sbjct: 883 TPRVKPGVT 891