Pairwise Alignments

Query, 692 a.a., flagellar biosynthesis protein FlhA from Escherichia coli ECRC100

Subject, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

 Score =  715 bits (1846), Expect = 0.0
 Identities = 364/676 (53%), Positives = 496/676 (73%), Gaps = 8/676 (1%)

Query: 22  LAGPILILLILSMMVLPLPAFILDLLFTFNIALSIMVLLVAMFTQRTLEFAAFPTILLFT 81
           +  P+++L  L+M+VLP+PAF+LDL FTFNIALS++VLLV ++T+R L+FAAFPT+LL  
Sbjct: 22  IGAPVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLDFAAFPTVLLIA 81

Query: 82  TLLRLALNVASTRIILMEGHTGAAAAGKVVEAFGHFLVGGNFAIGIVVFVILVIINFMVI 141
           TLLRLALNVASTR++L+ GH G  AAG V+EAFG+ ++GGN+A+G+VVF+IL+IINFMV+
Sbjct: 82  TLLRLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVFLILMIINFMVV 141

Query: 142 TKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDGA 201
           TKGAGRI+EV ARF LD +PGKQMAIDADLNAGLI +++A+ RR EVT+EADFYGSMDGA
Sbjct: 142 TKGAGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTKEADFYGSMDGA 201

Query: 202 SKFVRGDAIAGILIMVINVVGGLLVGVLQHGMSMGHAAESYTLLTIGDGLVAQIPALVIS 261
           SKFV+GDAIAGILI+ IN++GGL +G++Q+ +    A E YTLLTIGDGLVAQIP+L++S
Sbjct: 202 SKFVKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDGLVAQIPSLLLS 261

Query: 262 TAAGVIVTRVSTDQDVGEQMVNQLFSNPSVMLLSAAVLGLLGLVPGMPNLVFLLFTAGLL 321
             A ++VTR +TD+D+G+Q++ QLF NP  + ++A +L ++G+VPGMP+  FL       
Sbjct: 262 IGAAIMVTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMPHFAFLFLALLAS 321

Query: 322 GLAWWIRGREQKAPAEPK--PVKM-AENNAVVEATWNDVQLEDSLGMEVGYRLIPMVDFQ 378
           G A+W+  R+QK  AE K  P K   E     E +W+DVQ  D +G+EVGYRLIP+VD  
Sbjct: 322 GAAYWLH-RKQKTKAENKNLPAKSDVETPTQRELSWDDVQPVDVIGLEVGYRLIPLVDKD 380

Query: 379 QDGELLGRIRSIRKKFAQEMGFLPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRWL 438
           Q GELL R++ +RKK +Q+ GFL P VHIRDN++L P  YRI + GV +G  +  P + L
Sbjct: 381 QGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVAVGEAEIRPDQEL 440

Query: 439 AINPGTAAGTLPGEATVDPAFGLNAIWIESALKEQAQIQGYTVVEASTVVATHLNHLISQ 498
           AINPG   G + GE T DPAFGL+A+WI    +E AQ  GYTVV++STV+ATHL+ L++ 
Sbjct: 441 AINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSSTVLATHLSQLLTN 500

Query: 499 HAAELFGRQEAQQLLDRVAQEMPKLTEDLVPGVVTLTTLHKVLQNLLDEKVPIRDMRTIL 558
           +AA+L G +E Q LL+ +++  PKL E+ VP  ++L  + KVLQNLL E +PIRD+RTI+
Sbjct: 501 NAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLHEAIPIRDIRTIV 560

Query: 559 ETLAEHAPIQSDPHELTAVVRVALGRAITQQWFPGKDEVHVIGLDTPLERLLLQALQGGG 618
           +TL+E+A    +P  LTA VR++L R I Q+    + E+ VI L   LE++L Q +Q  G
Sbjct: 561 QTLSEYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVITLIPELEQILHQTMQASG 620

Query: 619 ----GLEPGLADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSRFLRRSLPQLVVLSN 674
               G+EPGLA+RL      A   QE+ G P VLL +  LR  L++F++ ++P L VLS 
Sbjct: 621 GESAGIEPGLAERLQMALSHATQEQELKGEPAVLLTSGVLRSTLAKFVKNTIPNLRVLSY 680

Query: 675 LELSDNRHIRMTATIG 690
            E+ D + IR+   +G
Sbjct: 681 QEIPDEKQIRIVQAVG 696