Pairwise Alignments

Query, 692 a.a., flagellar biosynthesis protein FlhA from Escherichia coli ECRC100

Subject, 720 a.a., Flagellar biosynthesis protein FlhA (NCBI) from Rhodospirillum rubrum S1H

 Score =  533 bits (1372), Expect = e-155
 Identities = 284/673 (42%), Positives = 417/673 (61%), Gaps = 8/673 (1%)

Query: 25  PILILLILSMMVLPLPAFILDLLFTFNIALSIMVLLVAMFTQRTLEFAAFPTILLFTTLL 84
           P  ++ IL +++LP+P ++LD++   ++ LS+++L+  +F ++ LEF+ FP +LL TT+L
Sbjct: 48  PFGLIAILVVLILPMPTWLLDIMLAMSLTLSVLILMTVVFIRKALEFSTFPMVLLITTML 107

Query: 85  RLALNVASTRIILMEGHTGAAAAGKVVEAFGHFLVGGNFAIGIVVFVILVIINFMVITKG 144
           RLALN+ASTR+IL +GH G AAAG V+EAFG F++GGNF IG++VF ILV++NFMVITKG
Sbjct: 108 RLALNLASTRLILAQGHEGTAAAGHVIEAFGGFIMGGNFVIGVIVFSILVLVNFMVITKG 167

Query: 145 AGRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDGASKF 204
           A RIAEV ARF LD MPGKQMAIDADL++GLI E EA++RR E+ +E+DF+G+MDGASKF
Sbjct: 168 ATRIAEVTARFTLDAMPGKQMAIDADLSSGLIDETEARRRREEMQKESDFFGAMDGASKF 227

Query: 205 VRGDAIAGILIMVINVVGGLLVGVLQHGMSMGHAAESYTLLTIGDGLVAQIPALVISTAA 264
           VRGDAIAGI+I  INV+GG+++G+ Q+ ++   AA +YT LT+GDGLV+QIPAL+IS AA
Sbjct: 228 VRGDAIAGIIITFINVIGGMIIGIAQNDLTFSEAANTYTALTVGDGLVSQIPALIISVAA 287

Query: 265 GVIVTRVSTDQDVGEQMVNQLFSNPSVMLLSAAVLGLLGLVPGMPNLVFLLFTAGLLGLA 324
           GV+V++          ++ Q  + P  + +SA + G L LVPG P L FLL      G A
Sbjct: 288 GVMVSKGGLTTTAETALIGQFTAYPKALGMSAFLAGALALVPGTPALPFLLLAGLTGGAA 347

Query: 325 WWIRGRE---QKAPAEPKPVKMAENNAVVEATWNDVQLEDSLGMEVGYRLIPMVDFQQDG 381
           WW+  +    ++  AE       +   V E   +     D + +E+GY L+ +++   + 
Sbjct: 348 WWLNRKASNIKRDEAEHAQELATQEIPVAEEPISTALKIDLVRLELGYGLLSLINTAHNQ 407

Query: 382 ELLGRIRSIRKKFAQEMGFLPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRWLAIN 441
            L  +I+++R+  A +MGF+ P V I+DNM L    YRI +K VE G GD  P   L ++
Sbjct: 408 RLTDQIKALRRALATDMGFVMPPVRIQDNMQLAANTYRIYIKEVEAGHGDLRPTMLLVMD 467

Query: 442 PGTAAGTLPGEATVDPAFGLNAIWIESALKEQAQIQGYTVVEASTVVATHLNHLISQHAA 501
           P     TL GE T +P FGL A+W++ + +E+A  +GYTVV+  TV+ TH+  ++  H A
Sbjct: 468 PRGDEITLAGEKTHEPTFGLPAVWVDLSNREEAMFRGYTVVDPPTVITTHITEVVKDHMA 527

Query: 502 ELFGRQEAQQLLDRVAQEMPKLTEDLVPGVVTLTTLHKVLQNLLDEKVPIRDMRTILETL 561
           EL    E Q+LLD + +E  KL  D++P  ++ + + +VLQNLL E+V IRD+ TILE +
Sbjct: 528 ELLSYAETQKLLDDLDKEQQKLIADMIPTQISTSGVQRVLQNLLAERVSIRDLPTILEGV 587

Query: 562 AEHAPIQSDPHELTAVVRVALGRAITQQWFPGKDEVHVIGLDTPLERLLLQALQGGG--- 618
           AE      +   +T  VR  + R ++         V ++ L    E    +AL G G   
Sbjct: 588 AEACGATRNIMMITEHVRTRIARQLSDANVNEDGIVPLVTLSPQWETAFAEALIGQGEDR 647

Query: 619 --GLEPGLADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSRFLRRSLPQLVVLSNLE 676
              + P      +   ++   R  M G  PVLL +  +RP +   + R  P  VV+S  E
Sbjct: 648 QLSMAPSKLQEFIVGVRQTFERFAMQGESPVLLTSPMIRPYVRSIIERFRPMTVVMSQNE 707

Query: 677 LSDNRHIRMTATI 689
           +     I+    I
Sbjct: 708 IHPKAKIKTLGQI 720