Pairwise Alignments

Query, 692 a.a., flagellar biosynthesis protein FlhA from Escherichia coli ECRC100

Subject, 699 a.a., flagellar biosynthesis protein FlhA (RefSeq) from Shewanella loihica PV-4

 Score =  713 bits (1841), Expect = 0.0
 Identities = 370/703 (52%), Positives = 504/703 (71%), Gaps = 21/703 (2%)

Query: 3   NLAAMLRLPTNLKSTQWQILAGPILILLILSMMVLPLPAFILDLLFTFNIALSIMVLLVA 62
           +L A L     +K   ++ +  PIL+L  L+M+VLP+PAF+LD+LF+FNIAL+++VLLVA
Sbjct: 2   DLKATLGQIKQVKPANFKGIGTPILVLAALAMIVLPMPAFLLDILFSFNIALALVVLLVA 61

Query: 63  MFTQRTLEFAAFPTILLFTTLLRLALNVASTRIILMEGHTGAAAAGKVVEAFGHFLVGGN 122
           ++T R L+FAAFPT+LL  TLLRLALNVASTRI+L+EGH G  AAGKV+EAFG  ++GGN
Sbjct: 62  IYTDRPLDFAAFPTVLLVATLLRLALNVASTRIVLLEGHNGGDAAGKVIEAFGSVVIGGN 121

Query: 123 FAIGIVVFVILVIINFMVITKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEDEAK 182
           +A+G+VVF+IL+IINF V+TKGAGRI+EV ARF LD MPGKQMAIDADLNAG++ +D+A+
Sbjct: 122 YAVGLVVFLILIIINFAVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGILNQDQAR 181

Query: 183 KRRSEVTQEADFYGSMDGASKFVRGDAIAGILIMVINVVGGLLVGVLQHGMSMGHAAESY 242
            RR+EVT+EADFYG+MDGASKFV+GDAIAGI+I+VIN++GG ++G+ QHG+    A E Y
Sbjct: 182 IRRAEVTKEADFYGAMDGASKFVKGDAIAGIMILVINILGGFVIGMAQHGLDFSSAVEIY 241

Query: 243 TLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQDVGEQMVNQLFSNPSVMLLSAAVLGLL 302
           TLLTIGDGLVAQIP L++S AA ++VTR +   D+G+ +++Q+F NP  + ++A VL  +
Sbjct: 242 TLLTIGDGLVAQIPGLLLSIAAALMVTRQNESGDMGQMVMSQMFDNPKSLAIAAGVLLTM 301

Query: 303 GLVPGMPNLVFLLFTAGLLGLAWWIRGRE-----------QKAPAEPKPVKMAENNAVVE 351
           G+VPGMP+  FL F     G A+++  ++           + +PA P   K        E
Sbjct: 302 GIVPGMPHFAFLSFGLITAGGAYFLHRKKDLDRQRALEIAKSSPATPGDAKPK------E 355

Query: 352 ATWNDVQLEDSLGMEVGYRLIPMVDFQQDGELLGRIRSIRKKFAQEMGFLPPVVHIRDNM 411
            +W+DVQ  D++G+EVGYRLIP+VD  Q GELLGRI+ +RKK +QE+GFL P VHIRDN+
Sbjct: 356 LSWDDVQQVDTIGLEVGYRLIPLVDKGQGGELLGRIKGVRKKLSQELGFLVPAVHIRDNL 415

Query: 412 DLQPARYRILMKGVEIGSGDAYPGRWLAINPGTAAGTLPGEATVDPAFGLNAIWIESALK 471
           DL P  YRI + GV  G  D      LAINPG   G L G  T DPAFGL A+WI   L+
Sbjct: 416 DLAPNTYRISLMGVASGEADIRHDCELAINPGQVYGKLDGVETTDPAFGLEAVWIAPELR 475

Query: 472 EQAQIQGYTVVEASTVVATHLNHLISQHAAELFGRQEAQQLLDRVAQEMPKLTEDLVPGV 531
           E AQ  GYTVV+A+TVVATHL+ L++ +A++L G +E QQL+D +A+  PKL    +P V
Sbjct: 476 EHAQTLGYTVVDAATVVATHLSQLLTNNASKLLGYEEVQQLMDMLAKHSPKLVSGFIPDV 535

Query: 532 VTLTTLHKVLQNLLDEKVPIRDMRTILETLAEHAPIQSDPHELTAVVRVALGRAITQQWF 591
           + L T+ KV+QNLL+E V IRD++TI++TL E+ P  +D   LTA VR+AL R I Q+  
Sbjct: 536 LPLGTVVKVMQNLLNEGVSIRDLKTIVQTLLEYGPKSNDTEVLTAAVRIALKRMIVQEIS 595

Query: 592 PGKDEVHVIGLDTPLERLLLQALQGGGG----LEPGLADRLLAQTQEALSRQEMLGAPPV 647
             + E+ VI L   LE++L Q++Q  GG    +EP LA+R+     +A  RQEM+G P +
Sbjct: 596 GPEPEIPVITLAPELEQMLHQSMQATGGEGPNIEPSLAERMQKSLLDASQRQEMVGQPAI 655

Query: 648 LLVNHALRPLLSRFLRRSLPQLVVLSNLELSDNRHIRMTATIG 690
           LL +  LR  LSRF++ ++P L V+S  E+ D + IR+ + +G
Sbjct: 656 LLTSGMLRSTLSRFVKHTIPNLRVISYQEVPDEKQIRIVSAVG 698