Pairwise Alignments

Query, 308 a.a., flagellar motor protein MotB from Escherichia coli ECRC100

Subject, 393 a.a., Flagellar motor rotation protein MotB from Xanthomonas campestris pv. campestris strain 8004

 Score =  209 bits (532), Expect = 9e-59
 Identities = 122/311 (39%), Positives = 180/311 (57%), Gaps = 21/311 (6%)

Query: 10  VVKRRKAKSHGAAH--GSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRTPL- 66
           V+ RR  K  G  H  G+WK+A+ADF+TAMMAFFLV+WL++ ++ ++   I+EYFR P  
Sbjct: 8   VIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYFRNPSP 67

Query: 67  --------ATAVTGGDRISNSESPIPGGGDDYTQSQGEVN-KQPNIEEL---KKRMEQSR 114
                   +  + G    S S   + G  D     + E+  K+ N  +     +  ++ R
Sbjct: 68  LSGKSPAPSPGMNGPGGASTSMIKLGGTADMAKGQKDEMGRKRDNAADTDVDSRAKDKKR 127

Query: 115 LRKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRD 174
           L  L  DL + I+    L   +  L +DL  +GLRIQI+D QNRPMF  G   ++PY  D
Sbjct: 128 LEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYTVD 187

Query: 175 ILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGK 234
           ILR ++  +N +PN IS++GHTD   Y+S + GY+NWELSADRANA+RR L+ GG+   K
Sbjct: 188 ILRELSSFINQVPNHISITGHTDTTAYSS-DAGYTNWELSADRANAARRALVGGGMADAK 246

Query: 235 VLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQAEQAILHENAESQNEPVSALEKPEVA 294
           V RVVG+++++      P + +NRRIS++V+ + AEQA L     + ++   AL KP   
Sbjct: 247 VTRVVGLSSSVLFDKTNPQNPINRRISIVVMTQDAEQAAL-----AGSDQGVALGKPIPD 301

Query: 295 PQVSVPTMPSA 305
               VP +  A
Sbjct: 302 ADTHVPDLSGA 312