Pairwise Alignments

Query, 333 a.a., integrase from Escherichia coli ECRC100

Subject, 392 a.a., putative phage integrase, catalytic core from Phaeobacter inhibens DSM 17395

 Score = 63.5 bits (153), Expect = 8e-15
 Identities = 95/354 (26%), Positives = 145/354 (40%), Gaps = 40/354 (11%)

Query: 3   VRKIPSGKWLCEC-YPYGASGKRI---RKQFATKSEALSYERRLMNSRVGDE------FQ 52
           VR +PSG    +  Y  G   +R+   R    T  EA    + +M      E       Q
Sbjct: 31  VRVMPSGAKTYQAQYRKGGRTRRVSVGRHGKITVEEARKLAKEIMGQVAKGENPAEELSQ 90

Query: 53  DGSGPRLSELIARWFEMYGKTLSSGAERKVKLEAICSRLGDPFASQFDKNMFATYRERRL 112
               P ++ L  R+FE + K     + +K    AI     D F      +      ERR 
Sbjct: 91  HRKTPTVAALCERFFEAHAKERCKPSTQKEYRRAI-----DLFIVPAIGSFKVVDVERRD 145

Query: 113 SGEWNPKGKKKLSEATVNREQSYLHAVF--AELKRLGEWSGENPLTGIRKFREEEKELAF 170
             E + + + K  +A  NR    L  +F  AE+  L    G NP   + K+RE ++E  +
Sbjct: 146 IAELHHRFRDKPYQA--NRTLGVLSKMFNLAEIWGLRP-DGSNPCRHVPKYREIKRE-RY 201

Query: 171 LYVDEIERL--LIACDESRNKDLGVVV---RIGLATGARWSEAEGLKQSQVLPGRITFVK 225
           L  +E++RL  +++  E    +   VV   R+ + TG R  E + LK   +    +    
Sbjct: 202 LNQNELQRLGHVLSEVEREGTETPFVVAAFRLLILTGCRLGEIQTLKWDYITDTGMELPD 261

Query: 226 TKGKKNRTVPISPQLQAM--LPKKRGALFSPCYEAFDAAIKRAKIELP----------DG 273
           TK    R     P    +  LP+  G  +    E   A      ++ P           G
Sbjct: 262 TKTGARRIPLPQPARDVLTHLPRTPGNPY--VIEGKLAGQYATDLQHPWRRIRARAGLAG 319

Query: 274 QLTHVLRHTFASHFMMRGGNILVLQKILGHSDIKMTMRYAHFAPGHLEAAVELN 327
              H LRHT+AS+ +  G  I ++ ++LGHS I+ TMRYAH A   +  A E N
Sbjct: 320 VRIHDLRHTYASNAVSSGMPIQMVGRLLGHSQIQTTMRYAHLADDPVRQAAEEN 373