Pairwise Alignments

Query, 940 a.a., replication protein from Escherichia coli ECRC100

Subject, 861 a.a., replication endonuclease from Vibrio cholerae E7946 ATCC 55056

 Score =  221 bits (563), Expect = 2e-61
 Identities = 170/584 (29%), Positives = 252/584 (43%), Gaps = 92/584 (15%)

Query: 173 LPQLNKHQIQTLATMTAAMFSSTFEKLCDGFGATDGELTMDVTLKAYQMLARMALHLHAM 232
           L +L + +++ +A   A +  +  +       A   E      + AY+ LA        +
Sbjct: 177 LAELEQDELRDMAFRIAKIMEAYLQLTASRKHADREEDVDQAVVDAYEALAHFCTQTFGI 236

Query: 233 PPHYDALTTDKDRRNEPDTELLPGA-ILRLTCAEWWKRKLWLLRCEWREEQLRAACLVSR 291
                       R+ +  T L   + I+R+    WW  +L  +R   RE    A   VS 
Sbjct: 237 KA---------PRKYQKQTHLSASSDIMRMISDSWWLGRLVKVRKIMREHLAIAMGQVSN 287

Query: 292 KTSPYLSQDALSEFRAQREKTRDFLKSFML-ENEDGFTIDLETVYYAGVSNPVHRKAEMM 350
             SPY S D + E + Q+++  + +K+ +L + E     DL  +    VSNP  R+ E+M
Sbjct: 288 NASPYASWDCVREHQEQQQRNYEAIKNMVLFDEETEEEHDLWDMVKKSVSNPAIRRHELM 347

Query: 351 ATMKGLELLAEARGDKAVFLTVTCPSKYHATTENGHPNPKWNGATMRDSSDYLVNTFFAA 410
              +G E +    G + +FLT+T PSKYH + + G     WNGA+ RD+  YL N  +  
Sbjct: 348 VRCRGCEDIGNELGLQGLFLTLTTPSKYHNSYKKGGFIDHWNGASPRDAQAYL-NKKWQL 406

Query: 411 VRKKLNRDGLRWYGIRTVEPHHDGTVHWHMMVFAHPEEIDTIVSHTRDIAIQEDRHELGD 470
           +R KLNRD +RW+G+R  EPHHDGT HWH++++   E+I  +       A +EDR EL  
Sbjct: 407 IRAKLNRDEIRWFGVRVAEPHHDGTPHWHLLIWVRKEDISAVRDTFITYATEEDRGELHP 466

Query: 471 -------------------DITPRFKAEYVDGSKGTPTSYIATYIGKNLDSRAVDGIDPK 511
                              D  PR    Y+D +KGT T YIA YI KN+D  A+DG    
Sbjct: 467 EFEKEKQKPFRKGVYVGPLDYRPRCDFGYIDPTKGTATGYIAKYISKNIDGYAMDG---- 522

Query: 512 TGKPRVDHETGKSMTESVERAIGWARLHRVRQFQFFGIPSRQVWRELRRLASQ------- 564
                +  ETGK + +       W     +RQFQFFG      +RELRRLA+Q       
Sbjct: 523 ----DISDETGKPVKDMARNVSAWKSRWSIRQFQFFGGAPVTTYRELRRLANQNKKAFME 578

Query: 565 ---------------------------------------MARNPEGPQRLKDDAMDAVLA 585
                                                  +A++ E   + +   + AVL 
Sbjct: 579 YIFMQERADLISMYELLHYQLIGAFKPARVMTNQELVEVIAQSYEARAKTEIPHVAAVLR 638

Query: 586 AADAGCFTTYIEKQGGVLVPRKDYLIRTAYDLADELNDYGEQSVQIYGIWSPLIGESSRV 645
           +AD G +  YI  QGG  V RK+ L+   Y      + Y E   ++ GI +P       +
Sbjct: 639 SADEGRWHGYIMNQGGPFVKRKELLVTNVYQELPFASPYAEAIRKLEGIATP----EQVI 694

Query: 646 CTHPDNWKLVRR-KPGVEDSARENGFDLQ--GGPAAPWTRGNNC 686
            T    W + R+ K   E  A   G +    GG AA  +  NNC
Sbjct: 695 KTREKVWTIKRKGKETTEGEAVGFGSEATAFGGSAASRSSVNNC 738