Pairwise Alignments

Query, 411 a.a., NAD-dependent dihydropyrimidine dehydrogenase subunit PreA from Escherichia coli ECRC100

Subject, 326 a.a., putative dihydropyrimidine dehydrogenase [NADP+] precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 80.1 bits (196), Expect = 9e-20
 Identities = 83/322 (25%), Positives = 145/322 (45%), Gaps = 28/322 (8%)

Query: 5   DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPRFDHL 64
           DL  TF G+   NP  +SSS + N      +  + G G +V K++      ++    D L
Sbjct: 3   DLKTTFAGLSLRNPIIISSSGLTNSAGKNKRLAEAGAGAIVLKSL---FEEQIMLEADQL 59

Query: 65  VKEDTGFIGFKN---MEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGENEQQWEELAR 121
             +D  F    +    E I EH L E L  ++  K++    + IASI   ++ +W + A+
Sbjct: 60  --KDPAFYPEASDYLEEYIREHKLAEYLTLIKESKKECSIPI-IASINCYSDSEWVDFAK 116

Query: 122 LVQEAGADMIECNFSCPQM-TSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIG 180
            +QEAGAD +E N    Q    +  GS   +  +++    R +K+  T+P++ K+  N+ 
Sbjct: 117 QIQEAGADALEINILALQSDVQYTYGSFEQRHIDIL----RHIKQTVTIPVIMKLGDNLT 172

Query: 181 DMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISG--YSGKAVKPIA 238
           +   VAL  +   A+G AA+         D+N       +     +SG  +S  A     
Sbjct: 173 N--PVALIDQL-YANGAAAVVLFNRFYQPDIN-------IENMEQVSGEVFSTSADLATP 222

Query: 239 LRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMAS 298
           LR+I    +     D+  S  GG+   E   + +L GA+ ++V + I Q     + +   
Sbjct: 223 LRWIGIASSVVNKIDYAAS--GGVANPEAVVKAILAGASAVEVCSAIYQNTNAFIGESTR 280

Query: 299 GLSHYLADQGFDSLQEMVGLAN 320
            LS ++  +GF ++ +  G  N
Sbjct: 281 FLSAWMERKGFKNIAQFKGKLN 302