Pairwise Alignments

Query, 411 a.a., NAD-dependent dihydropyrimidine dehydrogenase subunit PreA from Escherichia coli ECRC100

Subject, 303 a.a., dihydroorotate dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  109 bits (272), Expect = 1e-28
 Identities = 88/316 (27%), Positives = 154/316 (48%), Gaps = 22/316 (6%)

Query: 5   DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPRFDHL 64
           DLS+    ++  NP   +S   G   E          GG++ K  G  +       +  +
Sbjct: 3   DLSVNIGELQMKNPVMTASGTFGYGEEFSDFIDIARIGGIIVK--GTTLHKREGNPYPRM 60

Query: 65  VKEDTGFIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGENEQQWEELARLVQ 124
            +  +G +    ++        E +    R+K+   +  +I ++ G   + + + A ++ 
Sbjct: 61  AETPSGMLNAVGLQNKGVDYFVEQIYP--RIKDIQTN--MIVNVSGSAIEDYVKTAEIIN 116

Query: 125 EAGA-DMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMC 183
           E      IE N SCP +    M    G S +   +  +AV+      ++ K++PN+ D+ 
Sbjct: 117 ELDKIPAIELNISCPNVKQGGMA--FGVSAKGASEVVKAVRAAYKKTLIVKLSPNVTDIT 174

Query: 184 EVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALRFIQ 243
           E+A AA+  GAD ++ INT+  +  ID  +K   PI++  +   G SG AVKPIALR + 
Sbjct: 175 EIARAAEESGADSVSLINTLLGMA-IDAERK--RPILS--TVTGGMSGAAVKPIALRMVW 229

Query: 244 QMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQV-TTGIMQYGYRI-VEDMASGLS 301
           Q+    +  + P+ G+GGI  W+DA EF+L GA+ +Q+ T   +     I VED   G++
Sbjct: 230 QV---AKAVNIPVIGLGGIMNWKDAVEFMLAGASAIQIGTANFIDPAVTIKVED---GIN 283

Query: 302 HYLADQGFDSLQEMVG 317
           +YL   G  S++E++G
Sbjct: 284 NYLERHGCKSVKEIIG 299