Pairwise Alignments

Query, 571 a.a., hydrogenase 4 catalytic subunit HyfG from Escherichia coli ECRC100

Subject, 561 a.a., NADH-ubiquinone oxidoreductase (NCBI) from Rhodospirillum rubrum S1H

 Score =  402 bits (1034), Expect = e-116
 Identities = 218/551 (39%), Positives = 329/551 (59%), Gaps = 7/551 (1%)

Query: 11  EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVQYLYYQHDGWLPVLFGNDERT 70
           + IL  +  +FPG V       P+++ +      +  +  Y++    G L      D   
Sbjct: 5   QTILDDINARFPGCVTRGLAPQPDRLYLRTTTEHIRTLAAYVFNDLKGRLVTGVCTDMGP 64

Query: 71  LNGHYAVYYALSMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYGLIPV 130
           + G Y + YA S++ AE   + +    D    + P++T  +P A W ERE  DM G++  
Sbjct: 65  VTGEYDIIYAFSLD-AEGILLTLTEPTDPKDPKVPTLTDLIPGADWHERENYDMLGVVAE 123

Query: 131 GLPDQRRLVLPDDWPEDMHPLRKDAMDYRLRPEPTTDSETYPFINE-GN-SGARVIPVGP 188
           G P+ RRL+L +DWPED+ P+RKD   +  +P P  +  T P  +  GN S A +I VGP
Sbjct: 124 GHPNPRRLLLSEDWPEDLFPMRKD-FPHDFKP-PKAEKITTPLRDPLGNESKATIISVGP 181

Query: 189 LHITSDEPGHFRLFVDGEQIVDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVCGICGF 248
              T DEP +FRLF +GE+I+ +DYR F+ HRG+EKL++T + YN+V F+++RVCGICGF
Sbjct: 182 FFPTLDEPAYFRLFCEGEEIIGSDYRGFFSHRGIEKLSDTVLDYNQVPFMAERVCGICGF 241

Query: 249 AHSVAYTNSVENALGIEVPQRAHTIRSILLEVERLHSHLLNLGLSCHFVGFDTGFMQFFR 308
            HS  Y  +VE+A GIE+P RA  IRSI++E+ERLHSHLL LGL+ H++GFDT  MQ +R
Sbjct: 242 VHSACYCMAVEDAAGIEIPPRAKYIRSIMMELERLHSHLLWLGLAGHYLGFDTVLMQSWR 301

Query: 309 VREKSMTMAELLTGSRKTYGLNLIGGVRRDILKEQRLQTLKLVREMRADVSELVEMLLAT 368
           +RE  M + E +TG+RKTYG+NL+GGVRRD+      + +  V ++  +  EL+  +   
Sbjct: 302 IREPIMWLVEEITGNRKTYGMNLVGGVRRDLDSAICDKIMAAVTKIGIECEELISAVAGD 361

Query: 369 PNMEQRTQGIGILDRQIARDYSPVGPLIRGSGFARDLRFDHPYADYGNIPKTLFTFTGGD 428
            +++ R   +G+L  + AR    VGP  R SG   D R D+PYA + ++        GGD
Sbjct: 362 ESLKMRMVKVGVLSHEDARGICVVGPTARASGVHIDARADYPYAAFPDLDFKPSFHEGGD 421

Query: 429 VFSRVMVRVKETFDSLAMLEFALDNMPDTPLLTEGFSYKP-HAFALGFVEAPRGEDVHWS 487
           +++R +VRV E   S+ +++  +  +P+  ++  GF   P      G  EAPRGE VH+ 
Sbjct: 422 IWARTLVRVDEVRSSVDLIKQMITKLPEGEIMA-GFGPIPAWREGYGIAEAPRGECVHYV 480

Query: 488 MLGDNQKLFRWRCRAATYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSCTDRVTLVDVRK 547
             G + + +RWR RAATY     +  ML+G ++ D P+IIGS+DPC+SCT+RV  VD + 
Sbjct: 481 QTGKDNRPYRWRVRAATYPQLQAVPLMLKGMSIGDFPIIIGSIDPCFSCTERVLTVDTKS 540

Query: 548 RQSKTVPYKEI 558
           +  +T   K++
Sbjct: 541 KAIRTYTEKDL 551