Pairwise Alignments

Query, 396 a.a., lytic murein transglycosylase B from Escherichia coli ECRC100

Subject, 433 a.a., membrane-bound lytic transglycolase-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  130 bits (327), Expect = 7e-35
 Identities = 106/353 (30%), Positives = 160/353 (45%), Gaps = 24/353 (6%)

Query: 49  VLLAACSSKPK----PTETETTTGTPSGGFLLEPQHNVMQMGGDFANNPNAQQFIDRMVN 104
           V L+ACSS P     P+    T    +     E Q N + +    A  P     + +   
Sbjct: 17  VSLSACSSSPTSSSTPSNNSDTAIVQTQAAAQEVQLNEI-ITSHAAAFPTCVTNLQKRAR 75

Query: 105 KHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTTSVKPPSGPNGAWLRYRKKFITPDNVQN 164
           + G   + +   ++  + +  V+    +Q   +           +  Y  K  T   V  
Sbjct: 76  REGLSEETINNTVASLQFVPKVIEFDQSQPEFSQT---------FTNYFTKRATDWRVNE 126

Query: 165 GVVFWNQYEDALNRAWQVYGVPPEIIVGIIGVETRWGRVMGKTRILDALATLSFNYPRRA 224
           G     ++   L +  Q YGVPP+ I+   G+ET +G   GK  +LD+LATL+   PRR+
Sbjct: 127 GRRLLKKHRVLLEQLAQQYGVPPQYILSFWGLETNYGSYKGKMSVLDSLATLACE-PRRS 185

Query: 225 EYFSGELETFLLMARDEQDDPLNLKGSFAGAMGYGQFMPSSYKQYAVDFSGDGHINLWDP 284
           +YF+ EL   L +      D   + GS+AGAMG+ QFMPS+Y +YA+D  GDG  +LW+ 
Sbjct: 186 DYFTTELMQALKLKEKYGFDKRTMVGSWAGAMGHTQFMPSAYAKYAIDGDGDGKADLWNS 245

Query: 285 V-DAIGSVANYFKAHGWVK----GDQVAVMANGQAPGLPNGFKTRYSISQLAAAGL--TP 337
             DA+ S AN+ +  GW +    G +V + +N     L  G K    +SQ AA  +  T 
Sbjct: 246 TEDALTSAANFLQHLGWQRNERWGREVLLPSNFGYEHL--GAKQALPLSQWAAQSVLQTN 303

Query: 338 QQPLGNHQQASLLRLDVGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQLGQAV 390
             PL      + L L  G     + G  NF  I R+N S  YA+ V  L   +
Sbjct: 304 GLPLPAIDLKAALYLPSGHTGPAFLGYENFNVIMRWNRSEFYAITVGHLADRI 356