Pairwise Alignments

Query, 692 a.a., formate hydrogenlyase transcriptional activator FlhA from Escherichia coli ECRC100

Subject, 507 a.a., Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  271 bits (693), Expect = 6e-77
 Identities = 184/522 (35%), Positives = 285/522 (54%), Gaps = 54/522 (10%)

Query: 194 TNAVLSRLDMDELVSEVAKEIHYYFDIDDISIVLRSHRKNKLNIYSTHYLDKQHPAHEQS 253
           T  + S L++++ +    + +  +  ID I           LNIY   Y D Q  AH   
Sbjct: 10  TQRLCSSLELEQSLRAYFEYVRQHLPIDGIY----------LNIYRPEYGDIQFLAH--- 56

Query: 254 EVDEAGT--LTERVFKSKEM-LLINLHERDDLAPYERMLFDTWGNQ------------IQ 298
            VDEA T  L ++V  S EM  L++  +R    P  R++ D   +Q            IQ
Sbjct: 57  -VDEAQTTALNKQVKISAEMEALLSQPDR----PVIRIINDLEHDQVTGFVAPQVIPNIQ 111

Query: 299 TLCLLPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLRQIAERVAIAVDNALAYQEIHRLKE 358
           ++ LL ++SG+T LGV+     ++  F   +  L+    + +++     L  + + R  +
Sbjct: 112 SVILLRMLSGNTHLGVVGFYAKQKAQFCHRHAELIEPHKDTLSLITAFNLKGRNLLRANQ 171

Query: 359 RLVDENLALTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELI 418
            L  +N  L +  N        +IG    +  V+ QVE +A+  ++VLILGETG GKE+I
Sbjct: 172 ALTQQNRLLKQAFNPCG-----VIGADSGLKRVMTQVEAIAKLHTSVLILGETGCGKEVI 226

Query: 419 ARAIHNLSGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLF 478
           A A+H  S R ++  +K+NC A+P  L++S+LFG+E+GAFTGA  ++ G FE A+  ++F
Sbjct: 227 ANAVHCKSQRADKPFIKVNCGAIPESLIDSELFGYEKGAFTGAEHRKAGFFEQANGGTIF 286

Query: 479 LDEVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDL 538
           LDE+G++PL +Q +LLRVLQ     R+G    I  D+R+IAAT+R+L+ MV  + FR DL
Sbjct: 287 LDEIGELPLSVQVRLLRVLQNGTITRVGGFDAINLDIRVIAATHRNLQAMVKKQTFREDL 346

Query: 539 YYRLNVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIP---AETLRTLSNMEWP 595
           +YRL VFPI +P LR+R  DIPLL + F   +A +   N+D +P   +E L +L++  WP
Sbjct: 347 WYRLAVFPIEIPSLRQRRSDIPLLVQHFIEVLAAKF--NLDKLPRVSSEQLDSLNHYHWP 404

Query: 596 GNVRELENVIERAVLLTRGNVLQLSLPDIALPEP-ETPPAATVVAQEGEDEYQL------ 648
           GNVREL NV+ERA++      L  +L  +   EP  +    T++        +L      
Sbjct: 405 GNVRELINVLERAMIEAPEGPLNFNLTQVDKVEPAASGKHETIIIDPSHASDKLVPLDVM 464

Query: 649 ----IVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLGI 686
               I   ++ T G + GP GAA+ L +   TL S+MK+LG+
Sbjct: 465 VSKYIAHAMRITGGKLYGPGGAAEMLDINPNTLRSKMKKLGL 506