Pairwise Alignments

Query, 485 a.a., dipeptide/tripeptide permease DtpC from Escherichia coli ECRC100

Subject, 500 a.a., dipeptide/tripeptide permease DtpA from Escherichia coli Nissle 1917

 Score =  203 bits (517), Expect = 1e-56
 Identities = 138/472 (29%), Positives = 239/472 (50%), Gaps = 20/472 (4%)

Query: 6   QPRAIYYIVAIQIWEYFSFYGMRALLILYLTHQLGFDDNHAISLFSAYASLVYVTPILGG 65
           QP+A Y I +I++WE F +YG++ ++ +YL  QLG  +  +I+LFS++++LVY    +GG
Sbjct: 19  QPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGG 78

Query: 66  WLADRLLGNRTAVIAGALLMTLGHVVLGIDTNSTFSLYLALAIIICGYGLFKSNISCLLG 125
           WL D++LG +  ++ GA+++ +G+ ++    +    +Y+ +A I  G GLFK+N S LL 
Sbjct: 79  WLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLS 138

Query: 126 ELYDENDHRRDGGFSLLYAAGNIGSIAAPIACGLAAQWYGWHVGFALAGGGMFIGLLIFL 185
             Y++ND R DG F++ Y + NIGS  + IA    A  YGW V FAL+  G+ I ++ F 
Sbjct: 139 TCYEKNDPRLDGAFTMYYMSVNIGSFFSMIATPWLAAKYGWSVAFALSVVGLLITIVNFA 198

Query: 186 SGHRHFQSTRSMDKKALTSVKFALPVWSWLVVMLCLAPVFFTLLLEN-DWSGYLLAIVCL 244
              R  +   S       + +  L     +V ++ +A    T LL N + +   L +V  
Sbjct: 199 FCQRWVKQYGSKPDFEPINYRNLLLTIIGVVALIAIA----TWLLHNQEVARMALGVVAF 254

Query: 245 IAAQIIARMMIKFP-EHRRALWQIVLLMFVGTLFWVLAQQGGSTISLFIDRFVNRQAFNI 303
               I  +         RR +    +LM    +F+VL  Q  ++++ F  R V      +
Sbjct: 255 GIVVIFGKEAFAMKGAARRKMIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHTILGL 314

Query: 304 EVPTALFQSVNAIAVMLAGVVLAWLASPESHGNSTLRVWLKFAFGLLLMACGFMLLAFDA 363
            V    +Q++N   +++   +LA + +       TL +  KFA G+++ +  F++L   A
Sbjct: 315 AVEPEQYQALNPFWIIIGSPILAAIYNKM---GDTLPMPTKFAIGMVMCSGAFLILPLGA 371

Query: 364 RHAAADGQASMGVMVSGLALMGFAELFIDPVAIAQITRL---KMSGVLTGIYMLATGAVA 420
           + A+  G  S+  +V+   L    EL I  + +A + +L   ++ G + G + L T A A
Sbjct: 372 KFASDAGIVSVSWLVASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTT-AGA 430

Query: 421 NWLAGVVA-QQTTESQISG--MAIAAYQRFFSQMGEWTLACVAIIVVLAFAT 469
           N + G VA        ++   M++  Y R F Q+G       A+I VL   T
Sbjct: 431 NLIGGYVAGMMAVPDNVTDPLMSLEVYGRVFLQIG----VATAVIAVLMLFT 478