Pairwise Alignments

Query, 176 a.a., type 1 fimbria minor subunit FimF from Escherichia coli ECRC100

Subject, 187 a.a., fimbrial protein from Escherichia coli Nissle 1917

 Score = 72.8 bits (177), Expect = 3e-18
 Identities = 54/178 (30%), Positives = 78/178 (43%), Gaps = 8/178 (4%)

Query: 6   FYLLCAFLWLAVSHALAADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGAT 65
           F++  AF    +S        +T  G +    C +   S + +V +    A +F N+G  
Sbjct: 11  FFIFFAFFAFPLSGQANDSVVVTFTGILLAKSCDITTGSKDQSVKMGTYDANEFLNVGDV 70

Query: 66  TPVVPFRILLSPCGNAVSAV-------KVGFTGVADSHNANLLALENTVSAASGLGIQLL 118
           +P   F I +  C  A S V        V FTG AD+ N+ LL L     +A+GLGI++L
Sbjct: 71  SPSQTFTINVQGCPTAKSTVYSSGVSANVRFTGDADAINSALLRLSAGADSATGLGIEIL 130

Query: 119 NEQQNQIPLNAPSSAISWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ 176
           +     I +N  S          G  N L F  R  +TQ  V AG  NA   F ++YQ
Sbjct: 131 DNNDVAIAINGESGFRDLVLNENGDAN-LTFKLRYKSTQENVHAGQANALLYFDIDYQ 187