Pairwise Alignments

Query, 810 a.a., DEAD/DEAH box helicase from Escherichia coli ECRC100

Subject, 1049 a.a., DEAD/DEAH box helicase from Herbaspirillum seropedicae SmR1

 Score = 53.9 bits (128), Expect = 5e-11
 Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 44/255 (17%)

Query: 146 WKGYTQAQL--PVITQ--DYY---DDGSG-----KSPRYYQLQAINKTIEAVSNGQNRVL 193
           WK +T + L  P+  Q   +Y   D+  G     +S +YY   AI+  + A ++ +N   
Sbjct: 232 WKTFTASLLSIPMAHQLIGFYTVADESDGVLKVMRSYQYYAAHAISDKV-AKTDWKNPDR 290

Query: 194 LV----MATGTGKTYTAFQIIWRLWKSKNKKRILFLADRNILVDQTKNNDFQPFGTAMTK 249
           L       TG+GKT T+F+    +  SK+  +++FL DR  L  QT  N ++ F     +
Sbjct: 291 LGGHVWHTTGSGKTMTSFKSAQLIANSKDADKVVFLLDRIELGTQTLQN-YRNFAGDSNE 349

Query: 250 VSG-----------RTIDPAYEIHLALYQAITGPEEDQKAFKQVAPDFFD----LIVIDE 294
           V             ++ DPA  + ++  Q ++  ++++   K    +       + ++DE
Sbjct: 350 VQATEYTEVLVKKLKSADPADTLIVSSIQKMSRLKDEEDGLKGDDLEKMRAKRIVFIVDE 409

Query: 295 CHRGSASEDSAWREILDYFSSATQIGLTATPKETHEV----SSTDYFGDPVYVYSLKEGI 350
           CHR +  +     +I + F  A   G + TP     +    ++ D FG  ++ YS+ +GI
Sbjct: 410 CHRSTFGD--MLIDIKESFPGAVFFGFSGTPIHKENIRKDNTTIDVFGGELHRYSIADGI 467

Query: 351 ED----GFLAPYKVV 361
            D    GF  PY V+
Sbjct: 468 RDKNVLGF-DPYMVM 481