Pairwise Alignments

Query, 482 a.a., Cu(+)/Ag(+) sensor histidine kinase CusS from Escherichia coli ECRC100

Subject, 491 a.a., sensor kinase CusS (RefSeq) from Shewanella sp. ANA-3

 Score =  521 bits (1341), Expect = e-152
 Identities = 271/480 (56%), Positives = 346/480 (72%), Gaps = 1/480 (0%)

Query: 1   MVSKPFQRPFSLATRLTFFISLATIAAFFAFAWIMIHSVKVHFAEQDINDLKEISATLER 60
           M SKP + PFSL+ RLTFFISL+TI AF AF W M+HSV+ HFAEQD++DL++IS TL R
Sbjct: 1   MHSKPSRHPFSLSLRLTFFISLSTILAFIAFTWFMLHSVENHFAEQDVSDLQQISTTLNR 60

Query: 61  VLNHPDETQARRLMTLEDIVSGYSNVLISLADSHGKTVYHSPGAPDIREFARDAIPDKDA 120
           +L  P++   +++  +++ ++ Y NV + L +  G+ ++ S     +R     A   + +
Sbjct: 61  ILQSPEDPDEKKVSKIKESIASYRNVALLLLNPRGEVLFSSAQGAALRPAVNSADFSEHS 120

Query: 121 RGGEVFLLSGPTMMMPGHGHGHMEHSNWRMISLPVGPLVDGKPI-YTLYIALSIDFHLHY 179
              +VFL +      P      M+   +R+I+     +  GK   Y +   LSI+FHLHY
Sbjct: 121 HARDVFLWTVEDPARPMDTGSEMKMETYRIIASSGQAIFQGKQQNYVMLTGLSINFHLHY 180

Query: 180 INDLMNKLIMTASVISILIVFIVLLAVHKGHAPIRSVSRQIQNITSKDLDVRLDPQTVPI 239
           ++ L   LI  A VIS+LIV I+ +AV +GH P+R+VS  I++ITS++LD RL+P  VPI
Sbjct: 181 LDALKKNLIAIAVVISLLIVLIIRIAVRQGHLPLRNVSNAIKSITSENLDTRLEPTRVPI 240

Query: 240 ELEQLVLSFNHMIERIEDVFTRQSNFSADIAHEIRTPITNLITQTEIALSQSRSQKELED 299
           ELEQLV+SFNHMI +IEDVFTRQ+NFSADIAHEIRTPITNL+TQTEIALSQ R+QKELED
Sbjct: 241 ELEQLVISFNHMIGKIEDVFTRQANFSADIAHEIRTPITNLVTQTEIALSQDRTQKELED 300

Query: 300 VLYSNLEELTRMAKMVSDMLFLAQADNNQLIPEKKMLNLADEVGKVFDFFEALAEDRGVE 359
           VLYS+LEE  RM KMVSDMLFLAQADNNQLIP++   +L  EV KVF+FFEA AE+R + 
Sbjct: 301 VLYSSLEEYNRMTKMVSDMLFLAQADNNQLIPDRVRFDLRAEVMKVFEFFEAWAEERNIT 360

Query: 360 LQFVGDECQVAGDPLMLRRALSNLLSNALRYTPPGEAIVVRCQTVDHLVQVIVENPGTPI 419
           L+F G  C V GDP M RRA++NLLSNALRYTP G+AI V  +  +    +++ENPG PI
Sbjct: 361 LKFNGMPCLVEGDPQMFRRAINNLLSNALRYTPEGQAITVSIREQESFFDLVIENPGKPI 420

Query: 420 APEHLPRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVVAHKGTVAVTSNARGTRFVIVLP 479
             EHL RLFDRFYRVDPSRQRKGEGSGIGLAIVKSIV AH G V V S+ R TRF++ +P
Sbjct: 421 PEEHLSRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVEAHHGRVQVESDVRSTRFILSVP 480