Pairwise Alignments

Query, 786 a.a., DEAD/DEAH box helicase from Escherichia coli ECRC100

Subject, 938 a.a., type III restriction protein res subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 76.3 bits (186), Expect = 7e-18
 Identities = 92/345 (26%), Positives = 144/345 (41%), Gaps = 35/345 (10%)

Query: 428 QEEAVSALLR-----YDTGVLCAPTAFGKTVTAAAVIAKRKVNTLILV-HRTELLKQWQE 481
           Q+EA++AL +     +  G++   T  GKT  AA    +     ++ V HR E+L Q   
Sbjct: 249 QQEALAALAQSRSKGHRAGLVVLATGLGKTWLAAFDTIRAMAGRILFVAHRDEILTQ--- 305

Query: 482 RLAVF--LQAGDSIGIIGGGKHKPCGNIDIAVVQSISRQGEVEPLVRN-YGQIIVDECHH 538
            +A F  ++    +G   G + +    I  A VQ++ R G +    R+ +  I+VDE HH
Sbjct: 306 AMAAFRKVRPDAKLGRYTGAEKEADAEILFASVQTLGRIGHLRQFDRDHFDYIVVDEFHH 365

Query: 539 IGAVSFSAILKETNARYLLGLTATPIRRDGLHPIIFMYCGAIRHTAVRPKESPHNLEVLI 598
             A ++  +++     +LLGLTATP R DG   +     G      V   +    ++   
Sbjct: 366 AAARTYQKLIEHFTPGFLLGLTATPDRTDGADLL-----GLCSENLVYECDLFRGIDAGH 420

Query: 599 RSRFTSGHLPSDARIQDI------FREIALDHDRTVAIAEEAMKAFGQGRK-----VLVL 647
            S F    +P D     I      F   AL  D  +A    A+ A  Q RK      +  
Sbjct: 421 LSPFHYFGVPDDVDYAQIPWRSGQFDPTAL--DAALATEARALNALDQYRKRASGPAIGF 478

Query: 648 TERTDHLDEIASVMNSLKLSPFILHGRLSKKKRAMLISGLNALPPDSPRILLSTGRLIGE 707
                H D +A    +  L+   +H   S   RA   S L AL      IL +   +  E
Sbjct: 479 CCSVRHADYMAEYFRTAGLNAIAVHSGQSSAPRA---SSLAALGRGEIDILFAVD-MFNE 534

Query: 708 GFDHPPLDTLILAMPVSWKGTLQQYAGRLHREHTGKSDVRIIDFV 752
           G D P + T+++  P        Q  GR  R   GK  +++ID++
Sbjct: 535 GVDVPEIGTVLMLRPTESAIIWLQQLGRGLRRVEGKV-LQVIDYI 578