Pairwise Alignments

Query, 328 a.a., ABC transporter ATP-binding protein from Escherichia coli ECRC100

Subject, 344 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) from Rhodospirillum rubrum S1H

 Score =  275 bits (702), Expect = 2e-78
 Identities = 148/316 (46%), Positives = 205/316 (64%), Gaps = 4/316 (1%)

Query: 5   VLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGESGSGKSVTAMLIMRLLPTGSY 64
           +LD++ L +SF    G V A++ VS  + R EIVGLVGESGSGK+ T + +M L+   + 
Sbjct: 8   LLDVRDLRVSFRSERGLVRAVDGVSFSVGRQEIVGLVGESGSGKTQTLLSLMGLIDDPNA 67

Query: 65  CVHRGQISLLGDDVLNAREKQLRQWRGARVAMIFQEPMTALNPTRRIGLQMMDVIRHHQP 124
            V  G++  LG+D+L    K L+  RG ++AMIFQ+PMT+L P  R+G Q+++ I  H+ 
Sbjct: 68  IVE-GEVRFLGEDLLRLPRKALQALRGGKIAMIFQDPMTSLTPVHRVGDQIVEQILAHKG 126

Query: 125 ISRREARAKAIALLEEMQIPDTVEVMSRYPFELSGGMRQRVMIALAFSCEPQLIIADEPT 184
            SRR AR KA+ALLE ++I +   V++RYP ELSGGMRQRV+IA+A SC+P L++ADEPT
Sbjct: 127 GSRRAARDKALALLEAVRIANPTAVVARYPHELSGGMRQRVLIAMALSCDPALLLADEPT 186

Query: 185 TALDVTVQLQVLRLLKHKARDSGTAVLFISHDMAVVSQLCDSVYVMYAGSVIESGVTADV 244
           TALDVTVQ Q+L L+     D  ++V+ ++HD+ VV+++ D V VMY G V+E G+  +V
Sbjct: 187 TALDVTVQAQILDLIGRLRGDFASSVILVTHDLGVVAEVADRVLVMYGGRVVEEGLMDEV 246

Query: 245 IHHPRHPYTIGLLQCAPEHGVPR-QPLPAIPGTVPNLTHLPDGCAFRDRCYAAGAQCENV 303
              P HPYT GL    P    PR + L +IPG  P L+ LP GCAF  RC      C   
Sbjct: 247 FRDPLHPYTWGLFDSIPPLEGPRPRRLRSIPGNPPTLSSLPPGCAFGPRCRCRFDACSIS 306

Query: 304 PALTACGDNNQRCACW 319
           P +   G  N+R AC+
Sbjct: 307 PPVQRLG--NRRFACY 320