Pairwise Alignments

Query, 282 a.a., autoinducer 2 ABC transporter permease LsrC from Escherichia coli ECOR38

Subject, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  160 bits (406), Expect = 3e-44
 Identities = 92/239 (38%), Positives = 141/239 (58%), Gaps = 2/239 (0%)

Query: 5   VSVGSITGMCAVLLGMLLNAGYSLPVACVATLLLGLLAGFFNGVLVAWLKIPAIVATLGT 64
           +S+GS+    AVL+  L+NAG S  +A    +L GLL G  NG +     +P+ + TLG 
Sbjct: 110 LSIGSVYTFTAVLMASLVNAGLSAFIAAPIAILTGLLIGSLNGHITLRFGLPSFIVTLGG 169

Query: 65  LGLYRGIMLLWTGGKWIEGLPAEL-KQLSAPLLFGVSAIGWLTIILVAFMAWLLAKTAFG 123
           L  +RG +LL+ G   +   P  +   L +  LFGV+A     ++ V     LL +  FG
Sbjct: 170 LLFWRGAVLLYNGAVQVRFDPEPVFTSLFSGTLFGVNAAFIWIVLFVTGFHLLLHRHRFG 229

Query: 124 RSFYVTGDNLQGARQLGVRTEAIRIVAFSLNGCMAALAGIVFASQIGFIPNQTGTGLEMK 183
              + TG N   A  +G+ T  ++++AF++ G MAA+AGI+  +++G +    G GLE++
Sbjct: 230 NHVFATGGNRGAAEAIGINTSRVKLIAFAIAGGMAAVAGILATARVGSVQPGQGAGLELQ 289

Query: 184 AIAACVLGGISLLGGSGAIIGAVLGAWFLTQIDSVLVLLRIPAWWND-FIAGMVLLAVL 241
           AIAACV+GG+SL GG G+IIG  LG   +  I  VL+LLR P ++ D FIA +++LA +
Sbjct: 290 AIAACVIGGLSLRGGRGSIIGIFLGVLLIHTITDVLLLLRAPGFYLDMFIATLIVLAAI 348