Pairwise Alignments

Query, 282 a.a., autoinducer 2 ABC transporter permease LsrC from Escherichia coli ECOR38

Subject, 327 a.a., L-arabinose ABC transporter permease AraH from Pantoea sp. MT58

 Score =  149 bits (376), Expect = 8e-41
 Identities = 86/240 (35%), Positives = 133/240 (55%)

Query: 5   VSVGSITGMCAVLLGMLLNAGYSLPVACVATLLLGLLAGFFNGVLVAWLKIPAIVATLGT 64
           +SV S+     V+  +++N   SL +   A L+LG++ GF NG ++A LKI A++ TL T
Sbjct: 81  LSVASVIACAGVVTAVVINMTESLWIGVGAGLVLGMITGFINGFVIARLKINALITTLAT 140

Query: 65  LGLYRGIMLLWTGGKWIEGLPAELKQLSAPLLFGVSAIGWLTIILVAFMAWLLAKTAFGR 124
           + + RG+  +++ GK +        +L      GV A  WLT+  +    +LL KT FGR
Sbjct: 141 MQIVRGLAYIFSDGKAVGIEDERFFELGFANWLGVPAPIWLTLATMVIFGFLLNKTTFGR 200

Query: 125 SFYVTGDNLQGARQLGVRTEAIRIVAFSLNGCMAALAGIVFASQIGFIPNQTGTGLEMKA 184
           +    G N + AR  GV     RI+ F L+G ++A AGI+ AS++      T  G E+  
Sbjct: 201 NTLAIGGNEEAARLAGVPVVRTRIIIFILSGLVSAAAGIILASRMTSGQPMTSIGYELVV 260

Query: 185 IAACVLGGISLLGGSGAIIGAVLGAWFLTQIDSVLVLLRIPAWWNDFIAGMVLLAVLVFD 244
           I+ACVLGG+SL GG G I   V G   L  +++ + LL I  +    + G++LLA ++FD
Sbjct: 261 ISACVLGGVSLKGGIGKISYVVAGVLILGTVENAMNLLNISPFSQYVVRGLILLAAVIFD 320