Pairwise Alignments

Query, 282 a.a., autoinducer 2 ABC transporter permease LsrC from Escherichia coli ECOR38

Subject, 394 a.a., sugar ABC transporter permease from Pantoea sp. MT58

 Score =  139 bits (349), Expect = 1e-37
 Identities = 91/311 (29%), Positives = 147/311 (47%), Gaps = 66/311 (21%)

Query: 2   QTSVSVGSITGM---CAVLLGMLLNAGYSLPVACVATLLLGLLAGFFNGVLVAWLKIPAI 58
           +  +SVGS+ G+    A +  + L  G+ LP+  V TL++GLL G +NG  VA+ K+P+ 
Sbjct: 83  EIDLSVGSMMGLLGGAAAIFDVWL--GWPLPLTIVVTLVMGLLLGTWNGWWVAYRKVPSF 140

Query: 59  VATLGTLGLYRGIMLLWTGGKWIEGLPAELKQLSAPLL-------FGVSAIG------W- 104
           + TL  +  +RGI++  T G  +  +   + Q+    L       FGV+ +       W 
Sbjct: 141 IVTLAGMLAFRGILVGITDGTTVAPITPGMSQIGQSYLPGGVGFGFGVAGLALFTLWQWR 200

Query: 105 -----------------------LTIILVAFMAWLL------------------------ 117
                                  +T ILV    WLL                        
Sbjct: 201 LRLRRQQLGLPQGAASGTVGRQAITAILVLGAIWLLNDYRGVPTPVLLLAVLLLAGMFMA 260

Query: 118 AKTAFGRSFYVTGDNLQGARQLGVRTEAIRIVAFSLNGCMAALAGIVFASQIGFIPNQTG 177
            +TAFGR  Y  G N+  AR  G+     ++  F++NG M A+AG++ +S++G      G
Sbjct: 261 TRTAFGRRIYAIGGNIDAARLSGINVARTKLAVFAINGVMVAIAGLILSSRLGAGSPSAG 320

Query: 178 TGLEMKAIAACVLGGISLLGGSGAIIGAVLGAWFLTQIDSVLVLLRIPAWWNDFIAGMVL 237
              E+ AIAACV+GG SL GG G++ GAV+GA+ +  +D+ + ++ +P +W   + G +L
Sbjct: 321 NIAELDAIAACVIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAIL 380

Query: 238 LAVLVFDGRLR 248
           L  +  D   R
Sbjct: 381 LLAVWMDTATR 391