Pairwise Alignments

Query, 282 a.a., autoinducer 2 ABC transporter permease LsrC from Escherichia coli ECOR38

Subject, 327 a.a., Monosaccharide-transporting ATPase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  145 bits (367), Expect = 9e-40
 Identities = 78/246 (31%), Positives = 133/246 (54%), Gaps = 4/246 (1%)

Query: 5   VSVGSITGMCAVLLGMLLNAGYSLPVACVATLLLGL--LAGFFNGVLVAWLKIPAIVATL 62
           +SV +   +  +++ M+  A   LP+  +  + +GL  L G FNG+LV  L+IP IV TL
Sbjct: 65  LSVAANLALTGMVVSMVNVAAPGLPIVVILAIAIGLGTLLGMFNGLLVWKLQIPPIVVTL 124

Query: 63  GTLGLYRGIMLLWTGGKWIEG--LPAELKQLSAPLLFGVSAIGWLTIILVAFMAWLLAKT 120
           GT+ ++RGI+ L + GKW+    +    K      L G+  + W+ I+ V     ++ +T
Sbjct: 125 GTMTIFRGIIFLISDGKWVNSHEMSPAFKAFPRAELLGLPVLSWIAILAVILFTIVMTRT 184

Query: 121 AFGRSFYVTGDNLQGARQLGVRTEAIRIVAFSLNGCMAALAGIVFASQIGFIPNQTGTGL 180
             GR+FY  G N   A   G+     +  AF+++G +A L G ++ S+          G 
Sbjct: 185 TLGRAFYAAGGNPHAATYAGIDVGKTQFWAFTISGALAGLTGYLWVSRFAVSYVDIAGGF 244

Query: 181 EMKAIAACVLGGISLLGGSGAIIGAVLGAWFLTQIDSVLVLLRIPAWWNDFIAGMVLLAV 240
           E+  +AACV+GG+S++GG G + GA+LGA FL  I + L ++ I  +W   I+G  ++  
Sbjct: 245 ELDVVAACVIGGVSIMGGVGTVGGALLGALFLGIIKNALPVVDISPFWQLAISGGAIIIA 304

Query: 241 LVFDGR 246
           +  + +
Sbjct: 305 VALNAQ 310