Pairwise Alignments

Query, 337 a.a., two-component system response regulator RssB from Escherichia coli ECOR38

Subject, 367 a.a., response regulator receiver protein (RefSeq) from Shewanella loihica PV-4

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 6/254 (2%)

Query: 10  ILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLKL 69
           IL+VED+ VFRS++ ++ ++ GAT + A DG   LE       D+++ D++MP + GL +
Sbjct: 8   ILLVEDDPVFRSIVAAFLTNRGATVIEADDGQQGLERFSQHDFDIVLADLSMPILGGLDM 67

Query: 70  LEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMVFACLYPSMF 129
           L+ +  R   T  +VIS  + MAD+ +ALR+G  D L+KPV DL  +   +  C+  S  
Sbjct: 68  LKQMIKRKPDTLSIVISGNQVMADVVEALRVGASDYLVKPVNDLCLIENAIRQCVGGSSQ 127

Query: 130 NSRVEEE------ERLFRDWDAMVDNPAAAAKLLQELQPPVQQVISHCRVNYRQLVAADK 183
                E+      + L    + +  N  AA  + Q+L PP        +++Y      + 
Sbjct: 128 QDVQLEDLDELSYQELEEHLNLLEQNAEAAKSVQQQLFPPSVIDYPKAKIDYSLFKHDEV 187

Query: 184 PGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALLLRALFNGLLQEQLAHQNQRLPELGA 243
               +D   + E  L  Y        +    A++LL++  N  L++      + + E   
Sbjct: 188 SAYFIDSVNVGERYLIMYMAHFHPQDNRCAFASVLLKSFVNQKLKQFRNDNTETVIEPFN 247

Query: 244 LLKQVNHLLRQANL 257
           +L  +N  + ++ L
Sbjct: 248 MLSYLNERMSKSGL 261