Pairwise Alignments
Query, 882 a.a., Autotransporter adhesin AidA from Escherichia coli ECOR38
Subject, 1411 a.a., hypothetical protein from Sinorhizobium meliloti 1021
Score = 99.0 bits (245), Expect = 2e-24
Identities = 150/593 (25%), Positives = 231/593 (38%), Gaps = 129/593 (21%)
Query: 40 DGEVKDIDN---ALVITTGNGSYGVSVAGEGSNLTINKGVIVTTG---GLYPSGNSPLST 93
DG VK L+ G+ S S+ + S + + G I TTG G + T
Sbjct: 395 DGNVKTAGRDAEGLIAHAGDESIPTSINADAS-VIMQAGSITTTGDGAGGMIAETDIGPT 453
Query: 94 VYTASAVVSEYGGAVILQGNNTIVTTGDYSIGLLSQTNGNLNTDTIIRVNTDGSVNPH-- 151
T A + G ++ G G Y+I LS +G + + T H
Sbjct: 454 PSTGKATAVQRAGTIMTSGGEIGGNEGSYAIAALSFGSGLASIEQAGGSATTAGAQSHAL 513
Query: 152 --LSYEGNTFI--------VTAGNHAVGVLACASPGSARACVSSLDEESTADTGSNENNA 201
LS GNT + V G A G+ A A PG +LD + TA + A
Sbjct: 514 YALSIFGNTMVTQAAGSSAVATGAKASGLRALAGPGGGNEV--TLDGKVTAGSAP----A 567
Query: 202 KAKLDMAKGEITTHGTESYAAYANGTVVKAG-SKLDYT-----NASVTLTD--------- 246
+ A +IT A+GT ++ G S LD N++ TL
Sbjct: 568 VHTIGSAGSKITIGSAAEIDGSASGTAIRDGDSDLDAADETGGNSTATLAGKVTGDVVMG 627
Query: 247 ------------VDITTHGDNAHAIAARQGTVSFN-------QGEIHTTGPDAAI--AKI 285
+D +GD+ A AA G SF G D A A+
Sbjct: 628 LGNDIINLTGGVLDGDVYGDDRLATAA-DGDDSFTWSGGTWLSSFFGGNGSDTATVSAQS 686
Query: 286 YNG------------------GKVTLKNTSAVAHQGAGIVLESSINGQEATVDILSGSSL 327
Y+G ++ L +A A+ GA IV + A V IL G+ L
Sbjct: 687 YDGTHHYLDGGDDVSTADGWTDRLNLSGVTASAN-GANIVNWEIVTLDAADVTILDGA-L 744
Query: 328 RSANEILYNKNETSNVTITDSEVSSAADVFINNIKGHLAIDASNSKITGSANLSTDDSTH 387
+ +E + + +T+ V + +D F + G++AID ++ I +D +
Sbjct: 745 EAGSE------PETGLFLTNGSVLNGSDAFA--LAGNMAIDGTSQFIAFG-----EDIAN 791
Query: 388 TYLSLSDNSTWDIKTDSTVSKLTVDNSTVYISRADGKAFEPTRLTITENYVG-NNGVLHL 446
S+S N V+ TVD DG + L++ NY G N +++
Sbjct: 792 GVYSISGN---------LVNAGTVDMQ-------DGGTGDV--LSVGGNYTGAENSTVYI 833
Query: 447 RTELGDDNSATDKVVINGNTSGTTRVKVTNAGGSGAYTLNGIEIISVEGESNGEFI---- 502
T LGDD S TD + + G+T+G+T + + NAGG A T+ GI ++ V G S+G F+
Sbjct: 834 DTYLGDDASPTDHITVGGDTAGSTAISIGNAGGPSAQTVAGIRVVGVAGASSGTFVLANA 893
Query: 503 -------KDSRIFAGAYEYSLTRGNTEATNKNWYLTNFQATSGGETNSGGSSA 548
++ I GAY Y+L + N +W+L + A ++GG A
Sbjct: 894 NSEIKETGEAAITRGAYAYAL----RQVDNDDWFLQSTLAEDDTGPDTGGEQA 942
Score = 70.1 bits (170), Expect = 9e-16
Identities = 196/917 (21%), Positives = 315/917 (34%), Gaps = 151/917 (16%)
Query: 52 ITTGNGSYGVSVAGEGSNLTINKGVIV---TTGGLYPSGNSPLSTV------YTASAVVS 102
+T G+ ++ GS +TI + +G G+S L TA+
Sbjct: 560 VTAGSAPAVHTIGSAGSKITIGSAAEIDGSASGTAIRDGDSDLDAADETGGNSTATLAGK 619
Query: 103 EYGGAVILQGNNTIVTTGDYSIGLLSQTNGNLNTDTIIRVNTDGSVNPHLSYEGNTFIVT 162
G V+ GN+ I TG G+L +G++ D + DG + ++ G T++ +
Sbjct: 620 VTGDVVMGLGNDIINLTG----GVL---DGDVYGDDRLATAADG--DDSFTWSGGTWLSS 670
Query: 163 --AGNHA-VGVLACASPGSARACVSSLDEESTADTGSNENNAKAKLDMAKGEITTHGTES 219
GN + ++ S + D+ STAD ++ N A G +
Sbjct: 671 FFGGNGSDTATVSAQSYDGTHHYLDGGDDVSTADGWTDRLNLSGVTASANGANIVNWEIV 730
Query: 220 YAAYANGTVV----KAGSK----LDYTNASVTLTDVDITTHGDNAHAIA---ARQGTVSF 268
A+ T++ +AGS+ L TN SV +G +A A+A A GT F
Sbjct: 731 TLDAADVTILDGALEAGSEPETGLFLTNGSVL--------NGSDAFALAGNMAIDGTSQF 782
Query: 269 NQ-GEIHTTGPDAAIAKIYNGGKVTLKNTSAVAHQGAGIVLESSIN---GQEATV--DIL 322
GE G + + N G V +++ G G VL N + +TV D
Sbjct: 783 IAFGEDIANGVYSISGNLVNAGTVDMQDG------GTGDVLSVGGNYTGAENSTVYIDTY 836
Query: 323 SGSSLRSANEILYNKNETSNVTITDSEVSSAADVFINNIK---------GHLAIDASNSK 373
G + I + + I+ + + I+ G + +NS+
Sbjct: 837 LGDDASPTDHITVGGDTAGSTAISIGNAGGPSAQTVAGIRVVGVAGASSGTFVLANANSE 896
Query: 374 ITGSANLSTDDSTHTY-LSLSDNSTWDIKT-------------DSTVSKLTVDNSTVYIS 419
I + + + Y L DN W +++ + V T TV
Sbjct: 897 IKETGEAAITRGAYAYALRQVDNDDWFLQSTLAEDDTGPDTGGEQAVDPETEGGETVDPG 956
Query: 420 RADGKAFEPTRLTITENYVGNNGVLHLRTELGDDNSATDKVVINGNTSGTTRVKVTNAGG 479
G+ +P G G E D + + V G G T T G
Sbjct: 957 TGGGETVDP----------GTGG-----GETVDPGTGGGETVDPGTGGGETVDPGTGGGE 1001
Query: 480 SGAYTLNGIEIISVEGESNGEFIKDSRIFAGAYEYSLTRGNTEATNKNWYLTNFQATSGG 539
+ G E + G GE + + G T T T GG
Sbjct: 1002 TVDPGTGGGETVD-PGTGGGETVDPGTGGGETVDPETGGGETVDPGTGGGETVDPGTGGG 1060
Query: 540 ET-NSGGSSAPTVAPT-----PVLRSEAGSYVANLAAANTLFVMRLN---DRAGETRYID 590
ET + G TV P+ PV + Y NL L +R +R R
Sbjct: 1061 ETVDPGTGGGETVIPSYNQGVPVYET----YARNLLGFIQLPTLRRRASGERVPALRSCG 1116
Query: 591 PVTEQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGAELLTGGFTDSDSWRLG-- 648
V ++ + W +G T +H + GA + DS SW L
Sbjct: 1117 SVPLNVEGNQT-AACAEDNTVWARIDG---TRAHVEPEESGARVSE---YDSRSWLLQAG 1169
Query: 649 ------------VMAGYARDYNSTHSSVSDYRSKGSV--RGYSAGLYATWFADDISKKGA 694
++ G Y ++ VS + GS+ RGY G TW+ + G
Sbjct: 1170 IDALLHSSGKGELIGGLTAHYGGINTDVSSFYGDGSIDTRGYGLGATLTWYGQN----GF 1225
Query: 695 YIDAWAQYSWFKNSVKGDELAY--ESYSAKGATVSLEAGYGFALNKSFGLEAAKYTWIFQ 752
Y+D Q + F + + D L + G VS+EAG+ L TW
Sbjct: 1226 YLDGQGQLTRFDSDLDSDILGRLADGNDGLGYAVSIEAGHRIGLGD---------TWALT 1276
Query: 753 PQAQAIWMGVDHNAHTEANGSRIENDANNNFQTRLGFRTFIRTQEKNSGPHGDDFEPFVE 812
PQAQ + V+ + + G+R+ D N+ + R+G Q + + G +
Sbjct: 1277 PQAQLVNTSVNFDDFVDPYGARVSLDDGNSLRGRIGLALDREQQWQGAEGDGRSSRLYGT 1336
Query: 813 MNWIHN-SKDFAVSMNGVKVEQDGARNLGEIKLGVNGNLNPSASVWGNVGVQLGDNGYND 871
++ D ++GV + +GEI G+ G+ N + G G +D
Sbjct: 1337 IDLYREFLGDTRADVSGVSFGIEADDWIGEI--GIGGSYNWGDDKYSLYGEARASTGLSD 1394
Query: 872 ------TAMMVGLKYKF 882
VGLK KF
Sbjct: 1395 FGGSYAVRASVGLKMKF 1411
Score = 61.2 bits (147), Expect = 4e-13
Identities = 124/543 (22%), Positives = 210/543 (38%), Gaps = 75/543 (13%)
Query: 33 KHAVAIKDGEVKDI-DNALVITTGNGSYGV--------SVAGEGSNLTINKGVIVTTGGL 83
KH+ ++ DG+V DN V T GN S G+ S G S N+ I T+G
Sbjct: 228 KHSASLGDGDVTVAGDNITVTTGGNLSIGMEARVEDSKSGRGNASVFVRNEAAIETSG-- 285
Query: 84 YPSGNSPLSTVYTASAVVSEYGGAVILQGNNTIVTTGDYSIGLLSQT-NGNLNTDTIIRV 142
+ + A A + G + ++ + I T G+ +IG+ ++ +GN T+
Sbjct: 286 --------TRAHGAQAFNLDPGDSTVVLEKSKITTRGEGAIGIRAEAGDGNAVTEV---- 333
Query: 143 NTDGSVNPHLSYEGNTFIVTAGNHAVGVLACASPGSARACVSSLDEESTADTGSNENNAK 202
T GS I TAG A+G LA S G+ SLD + G N
Sbjct: 334 -TKGS------------IATAGASAIG-LAAISQGNMGEARVSLDGGDVSTGGDNAEGLI 379
Query: 203 AKLDMAKGEITTH----GTESYAAYANGTVVKAGSKLDYT----NASVTLTDVDITTHGD 254
A A G T ++ A G + AG + T +ASV + ITT GD
Sbjct: 380 ATAKGAGGTATARLVDGNVKTAGRDAEGLIAHAGDESIPTSINADASVIMQAGSITTTGD 439
Query: 255 NAHAIAARQGTVSFNQGEIHTTGPDAAIAKIYNGGKVTLKNTSAVAHQGAGIVLESSING 314
A + A + G +TG A+ + G + ++G+ + S
Sbjct: 440 GAGGMIAET-----DIGPTPSTGKATAVQR---AGTIMTSGGEIGGNEGSYAIAALSFGS 491
Query: 315 QEATVDILSGSSLRSA--NEILYNKNETSNVTITDSEVSS--AADVFINNIKGHLAIDAS 370
A+++ GS+ + + LY + N +T + SS A + ++ LA
Sbjct: 492 GLASIEQAGGSATTAGAQSHALYALSIFGNTMVTQAAGSSAVATGAKASGLRA-LAGPGG 550
Query: 371 NSKIT--GSANLSTDDSTHTYLSLSDNSTWD--IKTDSTVSKLTVDNSTVYISRADGKAF 426
+++T G + + HT S T + D + S + + + AD
Sbjct: 551 GNEVTLDGKVTAGSAPAVHTIGSAGSKITIGSAAEIDGSASGTAIRDGDSDLDAADETGG 610
Query: 427 EPTRLTITENYVGNNGVLHLRTELGDDNSATDKVVINGNTSGTTRVKVTNAGGSGAYTLN 486
T T+ G+ + LG+D V++G+ G R+ T A G ++T +
Sbjct: 611 NST-ATLAGKVTGD-----VVMGLGNDIINLTGGVLDGDVYGDDRL-ATAADGDDSFTWS 663
Query: 487 GIEIIS--VEGESNGEFIKDSRIFAGAYEYSLTRGNTEATNKNWYLTNFQATSGGETNSG 544
G +S G + ++ + G + Y L G+ +T W T+ SG ++
Sbjct: 664 GGTWLSSFFGGNGSDTATVSAQSYDGTHHY-LDGGDDVSTADGW--TDRLNLSGVTASAN 720
Query: 545 GSS 547
G++
Sbjct: 721 GAN 723
Score = 39.7 bits (91), Expect = 1e-06
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 9/161 (5%)
Query: 195 GSNENNAKAKLDMAKGEITTHGTESYAAYANGTVVKAGSKLDYTNASVTLTDVDITTHGD 254
G+NENN + GE +T E++ +Y+ G + ++ N +VT D I THG
Sbjct: 164 GANENNKSDVIADFSGEDST--IETFGSYSQG--IYGRTETGIGNVAVTAKDGTIVTHGL 219
Query: 255 NAHAIAARQGTVSFNQGEIHTTGPDAAIAKIYNGGKVTLKNTSAVAHQGAGIVLESSING 314
++ + + + S G++ G + + GG +++ + V +G S
Sbjct: 220 SSIGVRGLKHSASLGDGDVTVAGDNITVT---TGGNLSIGMEARVEDSKSGRGNASVFVR 276
Query: 315 QEATVDILSGSSLRSANEILYNKNETSNVTITDSEVSSAAD 355
EA ++ SG+ A + + S V + S++++ +
Sbjct: 277 NEAAIE-TSGTRAHGAQAFNLDPGD-STVVLEKSKITTRGE 315