Pairwise Alignments

Query, 368 a.a., tRNA 2-thiouridine(34) synthase MnmA from Escherichia coli ECOR38

Subject, 355 a.a., putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  224 bits (570), Expect = 4e-63
 Identities = 129/357 (36%), Positives = 198/357 (55%), Gaps = 18/357 (5%)

Query: 12  MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY--CTAAADLADAQAVCDKLGIEL 69
           +SGGVDSSV   LL +QGY+    ++K     DG EY  C+A  D+  + A+  K G+ L
Sbjct: 7   LSGGVDSSVVVHLLCEQGYKPTLFYIKIGM--DGAEYMDCSAEEDIEMSTAIARKYGLSL 64

Query: 70  HTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHY 129
             V+   EYW+NV    + + K G TPNPD++CNK IKF  F +   ++   D+ ATGHY
Sbjct: 65  EVVDLHKEYWENVAAYAIDKIKKGLTPNPDVMCNKLIKFGCFEQQVGKNF--DFTATGHY 122

Query: 130 VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVT 189
                 DGK+ L    D  KDQ+ FL  + + Q+++ +FP+G L K +VR+IA   GL +
Sbjct: 123 ATTIRQDGKTWLGTAKDPVKDQTDFLAQIDYLQVSKLMFPIGGLMKQEVREIASRAGLPS 182

Query: 190 AKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGI 248
           A++KDS GICF+G+  + +F+ R+L  + G II ++ G ++G H+G  +HT+GQRKGLG+
Sbjct: 183 ARRKDSQGICFLGKINYNDFVRRFLGEREGAIIELETGKKVGTHRGYWFHTIGQRKGLGL 242

Query: 249 GGTKDGTEEPWYVVDKDVENNILIVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT---MR 305
            G       PW+V+ KDVE NI+ V+ G+               H++   P+      + 
Sbjct: 243 SG------GPWFVIKKDVEENIIYVSHGYGVETQFGSEFRINDFHFITENPWKDAGKEID 296

Query: 306 CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE--VCLGGGII 360
            T K R+        +   +  +  ++  E +  + PGQ  V Y+ E  +C+G G I
Sbjct: 297 ITFKIRHTPEFTKGKLVQEEGGQFRILSSEKLQGIAPGQFGVIYDEEAGICVGSGEI 353