Pairwise Alignments

Query, 317 a.a., beta-ketoacyl-ACP synthase III from Escherichia coli ECOR38

Subject, 355 a.a., 3-oxoacyl-(acyl carrier protein) synthase III (RefSeq) from Shewanella loihica PV-4

 Score =  211 bits (536), Expect = 3e-59
 Identities = 119/321 (37%), Positives = 186/321 (57%), Gaps = 8/321 (2%)

Query: 2   YTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATR 61
           Y  I G G  +P    TN DL   +DTSDEWI  RTGI +RHI+  N   S +   AA R
Sbjct: 3   YATITGWGKCVPPATLTNHDLATFIDTSDEWIKPRTGISQRHISHVN--TSELATVAAQR 60

Query: 62  AIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSV 121
           A+  AG++ ++I LI++AT S     P+ A  +Q+ +G   C AFD+ AAC+GF Y L +
Sbjct: 61  ALAAAGVKGEEIDLIILATASPDTLIPNIASTVQANIGAS-CGAFDINAACSGFLYGLGL 119

Query: 122 ADQYVKSGAVKYALVVGSDVLARTCNPTDRGTIIIFGDGAGAAVLAASEEPG-IISTHLH 180
           A   +KSG  K  LV+G++ L+   + + R T ++FGDGAGA V+ A+++PG ++   L+
Sbjct: 120 ASSQIKSGQSKKVLVIGAERLSFYLDWSRRETAVLFGDGAGAVVVEATDQPGGVLGYELN 179

Query: 181 ADGSYGELLTL---PNADRVNPEN-SIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRS 236
            D +  ++L        DR N  +   ++   G E+FK A+  +  + +  L    +D+ 
Sbjct: 180 NDPAGRDILKAGFGTAMDRFNAASLDFYIEFNGQEIFKRAIAGMGKLSNTVLEKCGVDKD 239

Query: 237 QLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPG 296
           ++D ++PHQAN RII     ++ +  +  VV +  +GNTSAA++P A+ +A+  G IKP 
Sbjct: 240 EVDLVIPHQANERIIDTLINRMKIPKEKAVVNIANYGNTSAATIPIAICDALEKGLIKPN 299

Query: 297 QLVLLEAFGGGFTWGSALVRF 317
           Q +L  AFG G T  + L ++
Sbjct: 300 QTILSCAFGAGLTSAAVLFKW 320