Pairwise Alignments

Query, 317 a.a., beta-ketoacyl-ACP synthase III from Escherichia coli ECOR38

Subject, 319 a.a., 3-oxoacyl-(acyl carrier protein) synthase III (RefSeq) from Shewanella loihica PV-4

 Score =  439 bits (1130), Expect = e-128
 Identities = 219/319 (68%), Positives = 265/319 (83%), Gaps = 2/319 (0%)

Query: 1   MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAAT 60
           M+TKI+GTGSYLP QVR+N DLEKMVDTSD+WIV RTGI ER IAA +E+VSTMG+ AA 
Sbjct: 1   MHTKILGTGSYLPAQVRSNQDLEKMVDTSDQWIVERTGISERRIAAEDESVSTMGYAAAV 60

Query: 61  RAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALS 120
           RA+EMAG++  ++ +IV  TTSA +AFP+AAC+IQ+MLG+   PAFDVAAAC+GF YALS
Sbjct: 61  RALEMAGVDPSELDMIVCGTTSANNAFPAAACEIQAMLGVHTIPAFDVAAACSGFVYALS 120

Query: 121 VADQYVKSGAVKYALVVGSDVLARTCNPTDRGTIIIFGDGAGAAVLAASEEPGIISTHLH 180
           VADQ+VK+GA K  LV+G+DVL+R C P DR TII+FGDGAGAAV+ ASEEPGIISTH++
Sbjct: 121 VADQFVKTGAAKKVLVIGADVLSRLCEPEDRTTIILFGDGAGAAVVGASEEPGIISTHIY 180

Query: 181 ADGSYGELL--TLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQL 238
           ADG  G+LL  + P     + E   ++TM GN+VFKVAVT+L+H+V ETL  N +D+S++
Sbjct: 181 ADGRQGDLLKCSFPPRASESSEAVGYMTMKGNDVFKVAVTQLSHVVTETLRINQIDKSEI 240

Query: 239 DWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQL 298
           DWLVPHQAN RII ATAKKL MS+D VV+TL +HGNTSAASVP ALDEAVRDGRI+ GQL
Sbjct: 241 DWLVPHQANFRIIKATAKKLDMSLDKVVLTLAKHGNTSAASVPIALDEAVRDGRIQRGQL 300

Query: 299 VLLEAFGGGFTWGSALVRF 317
           +LLEAFG GF WGSALVRF
Sbjct: 301 LLLEAFGAGFAWGSALVRF 319