Pairwise Alignments

Query, 702 a.a., bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL from Escherichia coli ECOR38

Subject, 711 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  693 bits (1788), Expect = 0.0
 Identities = 359/712 (50%), Positives = 473/712 (66%), Gaps = 13/712 (1%)

Query: 1   MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60
           M + FA+  +G E  L  EL   GA E +    GV+F     L Y+  +W+RLASRI+L 
Sbjct: 1   MLNFFAAAPKGFEYSLAQELTEFGATEIKESVAGVYFTAPLTLAYRITLWTRLASRIVLV 60

Query: 61  LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120
           + +    S   LY     I+W+  F+   TF++ F G    I N+Q+GA+K+KDAIVD F
Sbjct: 61  IYKGPCESAEQLYNAAYCIDWSAHFSNRNTFSIDFHGTGGFINNTQFGALKIKDAIVDRF 120

Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180
                 RPNV R   DI+V+        +IA++ SG  LH RGYR   G AP+KE LAA 
Sbjct: 121 RDDGDARPNVARIDADIKVDAHFRNGVITIAMNFSGPSLHQRGYRSTTGEAPLKENLAAN 180

Query: 181 IVMRSGWQPG-TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239
           +++RSGW+   T LLDP CGSGT+LIEAA++A D APGL R R+GF  W +HD+A W E+
Sbjct: 181 MLVRSGWKAAPTTLLDPFCGSGTVLIEAALMAADIAPGLQRNRFGFEHWRRHDKATWHEI 240

Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299
             EA+ RA  G+      FYGSD D+R++  A+ NA+ AG+ ELI F   +VA   N  P
Sbjct: 241 VEEAKARASLGVKRCEVKFYGSDIDSRLVALAKRNAQNAGVLELIEF---NVANALNVEP 297

Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359
               G +++NPPYGERL S   L+ L+  LG   K +FGGW +++  +  +L+S L+L+A
Sbjct: 298 PAAEGYLITNPPYGERLGSVSELLQLYYQLGDKFKKEFGGWKVAMLCSDIELISALKLKA 357

Query: 360 DKQYKAKNGPLDCVQKNYHV-AESTPDSKPAM--------VAEDYANRLRKNLKKFEKWA 410
           DKQ K  NG L+C    Y + A+ST    P +        +A  +ANR++KN K+FEKWA
Sbjct: 358 DKQMKMFNGALECAFNLYTLHAQSTRRDTPVLPEGVDIADIAPAFANRIKKNAKQFEKWA 417

Query: 411 RQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVL 470
           ++EGI+ YRLYDAD+PEYNVAVD+Y D+VVVQEY  P +I     ++RL D++ A  + +
Sbjct: 418 QKEGIDSYRLYDADIPEYNVAVDKYLDYVVVQEYMAPASIPEAVTKRRLSDVLLALPAAI 477

Query: 471 GIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIAR 530
           G+ P+K+++KTRERQKG NQYQKL E+   L  TEY A   +NLT YLDTGLFLDHR+ R
Sbjct: 478 GVDPHKIIMKTRERQKGTNQYQKLDERKLELITTEYGAKFKLNLTGYLDTGLFLDHRLTR 537

Query: 531 RMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRA 590
           R++GQ SKG+  LNLFSYTGSA+VHA LGGA+S TTVDMS TYL WA+ N  LN L+G+ 
Sbjct: 538 RLVGQKSKGRRVLNLFSYTGSASVHAALGGAKSVTTVDMSNTYLAWAKENFALNNLSGKQ 597

Query: 591 HRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLVLMKDLKRLLRAGG 650
           +  +QADCL W+R+ NEQ+DLIFIDPPTFSNSKRMED+FDVQRDH+ L+  L +LL   G
Sbjct: 598 YEFVQADCLQWIRDCNEQYDLIFIDPPTFSNSKRMEDSFDVQRDHVNLLGMLIKLLSPNG 657

Query: 651 TIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA 702
            ++FSNNKR F+MD + L K+ +K Q I   TL  D+ RN  IHN WLIT A
Sbjct: 658 ELVFSNNKRKFKMDTETLTKMKIKVQNIDDMTLPLDYKRNPHIHNTWLITHA 709