Pairwise Alignments

Query, 285 a.a., deoxyribonuclease IV from Escherichia coli ECOR38

Subject, 283 a.a., apurinic endonuclease Apn1 (RefSeq) from Shewanella loihica PV-4

 Score =  379 bits (972), Expect = e-110
 Identities = 186/276 (67%), Positives = 219/276 (79%)

Query: 3   YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62
           ++GAHVSAAGG+ANA + A +I A AFALFTKNQR+W++APL    ID FKA CE+ +  
Sbjct: 6   WVGAHVSAAGGIANAPLNAQKIGANAFALFTKNQRRWQSAPLCPSQIDAFKANCEQANIH 65

Query: 63  SAQILPHDSYLINLGHPVAEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122
              ILPHDSYLINLGHP  E L +SR+AF+DEMQRCEQ+GL+LLNFHPGSHL +I  ++C
Sbjct: 66  PDAILPHDSYLINLGHPDEEQLARSREAFLDEMQRCEQMGLTLLNFHPGSHLNKIGIDEC 125

Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182
           LARI+ESIN+ALDKTQGV+A+IENTAGQGSNLG  FE LA IID VEDKSRVGVCIDTCH
Sbjct: 126 LARISESINLALDKTQGVSAIIENTAGQGSNLGHSFEQLAQIIDKVEDKSRVGVCIDTCH 185

Query: 183 AFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242
            FAAGYDL T   CE++F  F  IVG  YL+ MHLND+K+   SRVDRHHSLG G IG D
Sbjct: 186 MFAAGYDLTTLEACEESFGQFDAIVGNHYLKAMHLNDSKTPLNSRVDRHHSLGAGYIGMD 245

Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278
           AF +IM+      IPLILETI P+IW +EI WL++Q
Sbjct: 246 AFSYIMKHPATRQIPLILETIEPEIWPQEINWLRSQ 281