Pairwise Alignments

Query, 600 a.a., NADH-quinone oxidoreductase subunit C/D from Escherichia coli ECOR38

Subject, 392 a.a., NADH dehydrogenase I, D subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  317 bits (812), Expect = 6e-91
 Identities = 159/383 (41%), Positives = 229/383 (59%), Gaps = 1/383 (0%)

Query: 218 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 277
           LN GP HP+AHG  R+VL+L GE I    P IG  HRG EK+ E +++   +PY DR++Y
Sbjct: 11  LNFGPQHPAAHGVLRLVLELSGEVIERADPHIGLLHRGTEKLIEYKTYLQALPYFDRLDY 70

Query: 278 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 337
                 E  YVLAVEKL GITVP R   +R + +E+ R+ +H++  ++   D+GAMTP+ 
Sbjct: 71  ACPMNQEHAYVLAVEKLLGITVPPRAQYLRTLFNEVTRLINHIMNTTSMALDIGAMTPLL 130

Query: 338 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 397
           + F +R+ + +  E  +G RMH AWFR GGVA D+P      + +F D  PK L   E  
Sbjct: 131 YGFEEREHLLEFSERASGARMHAAWFRPGGVARDVPPDLLEDILKFCDSFPKYLDDVEHL 190

Query: 398 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 457
             +N I K R+  +    A++AL+WG TG  LR  G+ +D+RK++PY  Y   DF+IP G
Sbjct: 191 LDENRIFKQRTVDIGKVTAQQALDWGFTGPVLRGCGVPWDLRKSQPYDAYAAMDFDIPTG 250

Query: 458 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 517
               DCY R ++++ E RQS+RI+ QC+  MP+GP KA     TPP +      +E LI 
Sbjct: 251 AN-GDCYDRYLVRMAEQRQSIRIMRQCIEKMPDGPVKAVDHKVTPPSRGEMKSSMEALIH 309

Query: 518 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSYAHLQQIPAAIR 577
           HF   + G  +P  E++  +EA  G    YL SDG+   YR +IR+P Y HLQ +    R
Sbjct: 310 HFKLFTEGFKVPEGETYTAVEAATGEFGVYLVSDGTNRPYRCKIRSPGYVHLQGLDLMSR 369

Query: 578 GSLVSDLIVYLGSIDFVMSDVDR 600
           G +++D++  +GSID V  ++DR
Sbjct: 370 GHMLADVVANIGSIDVVFGEIDR 392