Pairwise Alignments

Query, 392 a.a., outer membrane protein assembly factor BamB from Escherichia coli ECOR38

Subject, 395 a.a., outer membrane protein assembly complex subunit YfgL (RefSeq) from Shewanella loihica PV-4

 Score =  293 bits (749), Expect = 8e-84
 Identities = 153/390 (39%), Positives = 233/390 (59%), Gaps = 5/390 (1%)

Query: 5   KLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTPTTAWSTSVGSGIGNFYSNLH 64
           K LL   LS+ LLS CS  + EE+ V  SPLP +E    P  +WS SVGSG+G++YS + 
Sbjct: 6   KTLLACSLSLGLLSACSSNDVEEEPV--SPLPQIEASVFPEVSWSASVGSGVGDYYSKIR 63

Query: 65  PALADNVVYAADRAGLVKALNADDGKEIWSVNLAE--KDGWFSKDP-ALLSGGVTVSGGH 121
           PA+    ++  DR G V A +   G+++WS+ ++   K+G  SK+  A LS G+T +   
Sbjct: 64  PAVRYGKLFVMDRYGEVAAYDEATGEQVWSLEISSWFKEGALSKNKGARLSSGITAARNK 123

Query: 122 VYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAV 181
           V+ G E   + A++   G + W     GE LS P V + +V++HTS G L+A N  DG  
Sbjct: 124 VFFGGESGLLGAVDAETGEMVWHVTAGGELLSAPTVGEDVVVVHTSTGALEAYNVDDGKQ 183

Query: 182 KWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEI 241
            W     +P+L+LRG  + A   G   VG  +G+V+ V+   GQ  W+Q I    G  E 
Sbjct: 184 LWVYESKLPTLTLRGTGSAAYEAGGFFVGTADGKVAVVVKSNGQAAWEQPIYTPKGGNEF 243

Query: 242 DRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQ 301
            R++DVD  P++V   ++A++YNGNL +++LR+G+++W R+  S N+    G  +YLVD 
Sbjct: 244 TRMADVDMKPLIVGENIYAVSYNGNLVSMELRTGRVVWSRKYSSFNELASAGLNLYLVDD 303

Query: 302 NDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQK 361
           + RV A+    G+  W+ S+L +R LTSPV++   LVVGD EGYLH+I+   G+ V + +
Sbjct: 304 HGRVYAVDKRNGLESWSNSELTNRELTSPVVFKDYLVVGDFEGYLHFIDRASGKLVGRVE 363

Query: 362 VDSSGFQTEPVAADGKLLIQAKDGTVYSIT 391
           VDSSG  ++P+  D K+ +Q++ G V  IT
Sbjct: 364 VDSSGLFSQPLVIDDKIYVQSRGGKVARIT 393