Pairwise Alignments

Query, 373 a.a., hydrogenase formation protein HypD from Escherichia coli ECOR38

Subject, 376 a.a., hydrogenase expression/formation protein HypD from Dechlorosoma suillum PS

 Score =  345 bits (886), Expect = e-100
 Identities = 173/373 (46%), Positives = 230/373 (61%), Gaps = 12/373 (3%)

Query: 1   MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGHTHAIFKFGLDQLLPEN 60
           M++VDEYR  E    L   + + A       ER    ME CGGHTHAI ++G+  LLP N
Sbjct: 1   MKYVDEYRDGELAQGLAAAIAKEAR-----PERRYHFMEFCGGHTHAISRYGVTDLLPAN 55

Query: 61  VEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRVPGKQG-SLLQAKARGADV 119
           V  IHGPGCPVCVLP+GR+D  + +A    VI CT+GD +RVP   G S+L+AKARGAD+
Sbjct: 56  VRMIHGPGCPVCVLPIGRVDQAIRLALKHNVILCTYGDCLRVPASDGLSMLKAKARGADI 115

Query: 120 RIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQAKARDVQNFYFFCQHITLI 179
           R+VYS  DALKLAQENP ++VVFF +GFETT P TA+ ++QAK   ++NF   C H+   
Sbjct: 116 RMVYSSADALKLAQENPEKQVVFFAIGFETTTPPTAVAIKQAKVMGLKNFSVLCCHVLTP 175

Query: 180 PTLRSLLEQPDNG------IDAFLAPGHVSMVIGTDAYNFIASDFHRPLVVAGFEPLDLL 233
             + ++LE P+        +D F+ P HVS +IG+  Y F A ++ +P+V+AGFEPLD++
Sbjct: 176 SAISNILESPEVRKLGTVPLDGFIGPAHVSTIIGSRPYEFFAEEYRKPVVIAGFEPLDVM 235

Query: 234 QGVVMLVEQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCVNGDSEWRGLGVIESSGV 293
           Q + MLV Q     ++VEN++ R V   GNL AQ  +A+VF +    EWRGL  +  S +
Sbjct: 236 QAIRMLVRQVNEGRAEVENEFSRAVSREGNLKAQNLVAEVFELRRAFEWRGLHTVPYSAL 295

Query: 294 HLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPHQCPLFGNTCNPQTAFGALM 353
            +   +  FDAE  F      V D     CG +L G  +P  C LFG  C P+   G+ M
Sbjct: 296 RIRGGFAEFDAEQRFGEDYVSVPDHKACECGAILRGAKRPQDCKLFGTVCTPENPVGSCM 355

Query: 354 VSSEGACAAWYQY 366
           VSSEGACAA Y Y
Sbjct: 356 VSSEGACAAHYTY 368