Pairwise Alignments

Query, 373 a.a., hydrogenase formation protein HypD from Escherichia coli ECOR38

Subject, 379 a.a., hydrogenase expression/formation protein HypD (RefSeq) from Shewanella sp. ANA-3

 Score =  335 bits (859), Expect = 1e-96
 Identities = 160/368 (43%), Positives = 232/368 (63%), Gaps = 6/368 (1%)

Query: 7   YRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGHTHAIFKFGLDQLLPENVEFIHG 66
           +R P+ +    E + + A     T + P+ IMEVCGGHTH I K+GL  LLPEN+EFIHG
Sbjct: 11  FRDPDTIASFAEDIAKCAR----TLKEPINIMEVCGGHTHTIMKYGLLDLLPENIEFIHG 66

Query: 67  PGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRVPGKQGSLLQAKARGADVRIVYSPM 126
           PGCPVCV+P  RID    +A    VI  T GD +RVPG QGSL   +A+G D+R +Y P+
Sbjct: 67  PGCPVCVMPKERIDQAAVLAQQENVILVTLGDMIRVPGSQGSLASFRAKGCDIRPIYDPL 126

Query: 127 DALKLAQENPTRKVVFFGLGFETTMPTTAITLQQAKARDVQNFYFFCQHITLIPTLRSLL 186
           D LK+A++NP + VVFF +GFET+ P TA+ LQ A+   + N  F   H+ + P + +++
Sbjct: 127 DTLKIARDNPDKIVVFFAIGFETSTPMTAVLLQLAEQEKLANLLFHINHVLVPPAIDAVM 186

Query: 187 EQPDNGIDAFLAPGHVSMVIGTDAYNFIASDFHRPLVVAGFEPLDLLQGVVMLVEQKIAA 246
           + P   ++AF+ P HVS++ G   Y      +  P+VV+GFEP+D+++ ++ +V QK+A 
Sbjct: 187 QDPKARVNAFIGPAHVSVISGAKIYRPAVKQYGTPVVVSGFEPVDVMESILRIVRQKVAG 246

Query: 247 HSKVENQYRRVVPDAGNLLAQQAIADVFCVNGDSEWRGLGVIESSGVHLTPDYQRFDAEA 306
            + ++ QY R V + GNL AQ  +   F       WRGLG I +S + L P+Y   DAE 
Sbjct: 247 TALLDIQYSRAVSEEGNLAAQAKVNQFFQTRPQFRWRGLGPIPNSALELRPEYAHRDAEK 306

Query: 307 HFRP-APQQVCDDPRA-RCGEVLTGKCKPHQCPLFGNTCNPQTAFGALMVSSEGACAAWY 364
           +F+   P +  DD +A +CG++L G  KP  C +FG  CNP+T  G+ MVSSEGAC A+Y
Sbjct: 307 YFKDRLPVKEIDDHKACQCGDILRGLAKPKDCKVFGRGCNPETPLGSCMVSSEGACNAYY 366

Query: 365 QYRQQESE 372
           +Y+  +S+
Sbjct: 367 RYQGIDSK 374