Pairwise Alignments

Query, 272 a.a., IS3 family transposase from Escherichia coli ECOR38

Subject, 279 a.a., IS3 family transposase (RefSeq) from Shewanella amazonensis SB2B

 Score =  209 bits (533), Expect = 4e-59
 Identities = 111/272 (40%), Positives = 162/272 (59%), Gaps = 3/272 (1%)

Query: 1   MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIQVAHIRTRETYGTRRLQTELAENGII 60
           +CQ+F V  SGYY W     S R++ +ERL  +++   + +   YG R+L  +L + G  
Sbjct: 4   LCQLFDVHPSGYYAWRSCAKSKRQRDNERLTGQLKQCWLESGGVYGYRKLHRDLRDLGEQ 63

Query: 61  VGRDRLARLRKELRLRCKQK-RKFRATTNPNHNLPVAPNLLNQTFTPTAPNQVWVADLTY 119
            G +R+ RL +   LR +   RK RA +   H   V PN L + F P APNQ WV D+TY
Sbjct: 64  CGINRVYRLMQRAGLRAQVGYRKPRARSGEPH--VVTPNRLERQFNPLAPNQAWVTDITY 121

Query: 120 VATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGS 179
           + T EGWLYL  + D+++  I+G++MG R+TKEL   AL MA+  ++P   ++ HSD+GS
Sbjct: 122 IKTHEGWLYLGAVMDLFSRHIIGWSMGSRITKELALDALLMAVWRRKPDGNVLVHSDQGS 181

Query: 180 QYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIR 239
           QY ++D+       GL+ SMSR+GNC+DNA  ESF+  LK E +    +  R+EA   + 
Sbjct: 182 QYTSHDWNEFLSAHGLEGSMSRRGNCHDNAVAESFFQLLKRERIRRKIYATRNEAKMDVF 241

Query: 240 EYIEIFYNRQRRHSRLGNISPAAFREKYHQMA 271
            YIE+FYN +R+HS    +SP  +  KY   A
Sbjct: 242 NYIEMFYNPKRQHSSNDGLSPLEYERKYFNEA 273