Pairwise Alignments

Query, 272 a.a., IS3 family transposase from Escherichia coli ECOR38

Subject, 269 a.a., integrase catalytic region from Marinobacter adhaerens HP15

 Score =  190 bits (483), Expect = 2e-53
 Identities = 101/263 (38%), Positives = 157/263 (59%), Gaps = 1/263 (0%)

Query: 1   MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIQVAHIRTRETYGTRRLQTELAENGII 60
           MC+V  V+RSG Y W+    SDR   ++RL  +I  ++  +   YG  R+  +L E G  
Sbjct: 3   MCRVLRVARSGLYQWLHKPLSDRAIDNQRLLAQILASYQGSSGVYGAPRVFLDLREAGET 62

Query: 61  VGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFTPTAPNQVWVADLTYV 120
            G++R+ARL KE +++  +  K         ++ + PN L   FT   P++ WV D+TY+
Sbjct: 63  CGKNRVARLMKEHKIKALRGYKAPRVIAGRPSI-LNPNKLQCEFTVGCPDKAWVTDITYI 121

Query: 121 ATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQ 180
            T +GWLYLA + D+++  +VG++M   + + L   AL MA+  +RP   ++ HSD+G+Q
Sbjct: 122 RTWQGWLYLAVVVDLFSRRVVGWSMKPTLHRSLVVDALLMAVWRRRPKEKVLIHSDQGTQ 181

Query: 181 YCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIRE 240
           Y + D+        L  SMSR+GNC+DNA +ESF+ +LK E +    +  RD A + + +
Sbjct: 182 YGSDDWHRFCLAHNLDPSMSRRGNCWDNAVVESFFSSLKKERIRKRIYKTRDLAKADVFD 241

Query: 241 YIEIFYNRQRRHSRLGNISPAAF 263
           YIE+FYNR RRH+ LG +SP AF
Sbjct: 242 YIEVFYNRVRRHTHLGGVSPEAF 264