Pairwise Alignments

Query, 272 a.a., IS3 family transposase from Escherichia coli ECOR38

Subject, 285 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  221 bits (562), Expect = 2e-62
 Identities = 114/266 (42%), Positives = 164/266 (61%)

Query: 1   MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIQVAHIRTRETYGTRRLQTELAENGII 60
           +CQV  VS  G   +     S R++ D  +   I+     +  +YG  R+  EL E G+ 
Sbjct: 18  LCQVLNVSTRGLRAFRSRPASRRQRMDMVVLAHIKEQSRLSLGSYGRPRMTEELKEVGVD 77

Query: 61  VGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFTPTAPNQVWVADLTYV 120
           VG  R+ RL +   +  ++ RKF+ATT+ +H   +APNLLN+ F+   PNQ W  D++Y+
Sbjct: 78  VGHRRVGRLMRANGITVERTRKFKATTDSDHTFNIAPNLLNRDFSAAGPNQKWAGDISYI 137

Query: 121 ATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQ 180
            T+EGWLYL+ I D+++  ++G+A+  RM ++L  +AL MA+  + PP G I HSDRGSQ
Sbjct: 138 WTREGWLYLSVILDLHSRRVIGWAVSNRMKRDLAIRALKMAIAFRSPPKGCIFHSDRGSQ 197

Query: 181 YCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIRE 240
           YC++DY+ I  Q G + SMS KGNCYDNA +E+F+ T+K E +    +  R +A   I E
Sbjct: 198 YCSHDYQKILRQHGFRASMSGKGNCYDNAAVETFFKTIKAELIWRRSWATRRQAEMAIFE 257

Query: 241 YIEIFYNRQRRHSRLGNISPAAFREK 266
           YI  FYN +RRHS LG  SP AF  K
Sbjct: 258 YINGFYNPRRRHSALGWKSPVAFERK 283