Pairwise Alignments

Query, 326 a.a., tRNA-modifying protein YgfZ from Escherichia coli ECOR38

Subject, 322 a.a., glycine cleavage T protein (aminomethyl transferase) (RefSeq) from Shewanella loihica PV-4

 Score =  202 bits (514), Expect = 9e-57
 Identities = 125/330 (37%), Positives = 181/330 (54%), Gaps = 13/330 (3%)

Query: 1   MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLA 60
           M  T   P+ P   A+  +    L    L ++TG  +  ++ GQVT D++ +  DQ    
Sbjct: 1   MTLTVSQPQWPLNEAQPAIVFSQLSHLGLISVTGEQARTFIHGQVTTDITSLEADQWRWG 60

Query: 61  AHCDAKGKMWSNLRLFRDGDGFAWIERRSVRESQLTELKKYAVFSKVTIAP-DDERVLLG 119
           AHCD KGKM ++ R F   D    +  R      L +L+KYAVFSK  +    D+  L G
Sbjct: 61  AHCDPKGKMLASFRTFAHQDALLMMMPRETLALDLPQLQKYAVFSKAELVDASDDWCLFG 120

Query: 120 VAGFQARAALANIFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRG 179
           V+G QA A +A  F E+ ++  ++   G   L       ER++I     T   L  K+  
Sbjct: 121 VSGEQALAWIAQAFGEIAAELTEI--PGGVIL----RDGERYIIAVKCDTQAELLAKI-- 172

Query: 180 EAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAK 239
           +  + +   W A+ I AG P + A +  QF+PQ  N+QA+ GISF KGCY GQE VAR K
Sbjct: 173 DQPIYDFSAWQAIEIAAGLPNLYARHQSQFVPQMCNVQAVDGISFTKGCYMGQETVARMK 232

Query: 240 FRGANKRALWLLAGSASRLPEAGEDLELKM--GENWRRTGTVLAAVKLEDGQVVVQVVMN 297
           +RG NKRAL+++ GSAS   +    LE+K+   E +RR GT+L AV+  DGQ+++  V+ 
Sbjct: 233 YRGGNKRALYIVQGSASVTIDDDSQLEMKLEDDEGYRRAGTILEAVQ-RDGQLLLSAVLP 291

Query: 298 NDMEPDSIFRVR-DDANTLRIEPLPYSLEE 326
           ND    +  RV  D+A+ L + PLPYSL+E
Sbjct: 292 NDTPLTAQLRVAGDEASVLTLAPLPYSLDE 321